RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CLEC18BQ6UXF7 455 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 VASH2Q86V25 355 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 NAXEQ8NCW5 288 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 THAP6Q8TBB0 222 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 OPA3Q9H6K4 179 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 ZNF552Q9H707 407 aaPredicted RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 ZDHHC11Q9H8X9 412 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 GP6Q9HCN6 339 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 GPR160Q9UJ42 338 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 ANXA10Q9UJ72 324 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 ZNF175Q9Y473 711 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 ZNF503-AS2A6NEH8 195 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 EEF1E1-BLOC1S5C9J1V9 151 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 GEMIN2O14893 280 aaKnown RBP13.53□□□□□ -0.24
MKS1-204ENST00000537529 SERPINF1P36955 418 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 SLC9A3R2Q15599 337 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 KCNRGQ8N5I3 272 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 PCNPQ8WW12 178 aaKnown RBP13.53□□□□□ -0.24
MKS1-204ENST00000537529 POM121Q96HA1 1249 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 SULT4A1Q9BR01 284 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 RAB18Q9NP72 206 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 RDH8Q9NYR8 311 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 ST3GAL6Q9Y274 331 aa13.53□□□□□ -0.24
MKS1-204ENST00000537529 IGKV1D-8A0A087WSZ0 117 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 C13orf42A0A1B0GVH6 325 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 PQLC2LA1A4F0 135 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 LRP3O75074 770 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 PDCD6O75340 191 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 FCGR3AP08637 254 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 CCL2P13500 99 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 PI3P19957 117 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 CALCRP30988 508 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 TNFSF10P50591 281 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 NUBP1P53384 320 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 RBM11P57052 281 aaKnown RBP13.52□□□□□ -0.24
MKS1-204ENST00000537529 UBA52P62987 128 aaKnown RBP13.52□□□□□ -0.24
MKS1-204ENST00000537529 PRDX4Q13162 271 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 RNFT1Q5M7Z0 435 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 ZNF611Q8N823 705 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 OR10AD1Q8NGE0 317 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 NANOS1Q8WY41 292 aaKnown RBP13.52□□□□□ -0.24
MKS1-204ENST00000537529 POM121L2Q96KW2 1035 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 NMES1Q9C002 83 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 C12orf49Q9H741 205 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 CFAP54Q96N23 3096 aa13.52□□□□□ -0.24
MKS1-204ENST00000537529 SS18L1O75177 396 aaPredicted RBP13.52□□□□□ -0.25
MKS1-204ENST00000537529 CST4P01036 141 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 SFTPBP07988 381 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 RRASP10301 218 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 FBXW9Q5XUX1 488 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 ALKAL2Q6UX46 152 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 SLC25A26Q70HW3 274 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 TMPRSS7Q7RTY8 843 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 ZDHHC23Q8IYP9 409 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 OR1K1Q8NGR3 316 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 ZNF2Q9BSG1 426 aaPredicted RBP13.52□□□□□ -0.25
MKS1-204ENST00000537529 NECAP2Q9NVZ3 263 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.25
MKS1-204ENST00000537529 KANTRA0A1W2PQU2 76 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 MSTNO14793 375 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 CRHP06850 196 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 GLRA1P23415 457 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 APLNRP35414 380 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 SUPT4H1P63272 117 aaKnown RBP13.51□□□□□ -0.25
MKS1-204ENST00000537529 ACOT7LQ6ZUV0 252 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 CALHM1Q8IU99 346 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 SAXO1Q8IYX7 474 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 VRK1Q99986 396 aaPredicted RBP13.51□□□□□ -0.25
MKS1-204ENST00000537529 CHMP1AQ9HD42 196 aaPredicted RBP13.51□□□□□ -0.25
MKS1-204ENST00000537529 ASCL3Q9NQ33 180 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 ZNF581Q9P0T4 197 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 CNTRLQ7Z7A1 2325 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 NKX2-8O15522 239 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 BCL2L11O43521 198 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 OR5H8P0DN80 308 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 PSMB6P28072 239 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 PMELP40967 661 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 P2RX3P56373 397 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 ATXN7L3Q14CW9 347 aaPredicted RBP13.51□□□□□ -0.25
MKS1-204ENST00000537529 PLEKHN1Q494U1 663 aaPredicted RBP13.51□□□□□ -0.25
MKS1-204ENST00000537529 ZNF660Q6AZW8 331 aaPredicted RBP13.51□□□□□ -0.25
MKS1-204ENST00000537529 ANGPTL6Q8NI99 470 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 MBD2Q9UBB5 411 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A10PA6NDY2 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A18PA6NE21 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A16PA6NEW6 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A20PA6NIJ5 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A8PA6NJQ4 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A7PA6NKC0 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A22PA8MWA6 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A12PA8MX19 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A5PA8MXJ8 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A23PA8MXZ1 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A15PP0C7V4 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A13PP0C7W8 464 aa13.5□□□□□ -0.25
MKS1-204ENST00000537529 FAM90A14PP0C7W9 464 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms