RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR13D1Q8NGV5 346 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 DIO2Q92813 273 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TMEM230Q96A57 120 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TMEM18Q96B42 140 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TVP23CQ96ET8 276 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SUSD3Q96L08 255 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SGCZQ96LD1 299 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 NMNAT3Q96T66 252 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CMKLR1Q99788 373 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 RBM24Q9BX46 236 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZNF552Q9H707 407 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZCCHC3Q9NUD5 404 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 FRRS1LQ9P0K9 344 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLC45A2Q9UMX9 530 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 MRPS17Q9Y2R5 130 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 LRP12Q9Y561 859 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 EML5Q05BV3 1969 aa3.28□□□□□ -1.89
MCF2-210ENST00000536274 ASCC3Q8N3C0 2202 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 SPAARA0A1B0GVQ0 90 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 FEZF1A0PJY2 475 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 TBX19O60806 448 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 PRAMEF11O60813 436 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 OR6A2O95222 327 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 DDAH2O95865 285 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CST4P01036 141 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 IFNA6P05013 189 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 GNB3P16520 340 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 FBLP22087 321 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 AK4P27144 223 aaPredicted RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 CCR5P51681 352 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 METAP1P53582 386 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SMIM11AP58511 58 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 RPL23AP62750 156 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 EIF5AP63241 154 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 SRSF4Q08170 494 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 ICAM4Q14773 271 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SP6Q3SY56 376 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 HIKESHIQ53FT3 197 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 AGTRAPQ6RW13 159 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SLC16A9Q7RTY1 509 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 C20orf196Q8IYI0 205 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 NOXO1Q8NFA2 376 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 OR2D3Q8NGH3 330 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 OR1N2Q8NGR9 330 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 LYPD6BQ8NI32 183 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 C2orf15Q8WU43 125 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 UBTD2Q8WUN7 234 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 DNASE2BQ8WZ79 361 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 FAM3DQ96BQ1 224 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 RPUSD4Q96CM3 377 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 BTF3L4Q96K17 158 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 IL17FQ96PD4 163 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 AQP10Q96PS8 301 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 IMMP2LQ96T52 175 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 NIPSNAP3BQ9BS92 247 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 ALG12Q9BV10 488 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CDH20Q9HBT6 801 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SIDT1Q9NXL6 827 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 TCFL5Q9UL49 500 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CLDN16Q9Y5I7 305 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 INSL5Q9Y5Q6 135 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 WSB1Q9Y6I7 421 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CACNA1IQ9P0X4 2223 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 HEATR1Q9H583 2144 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 TRAV26-1A0A087WT03 109 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 C2CD4DB7Z1M9 353 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 ERI3O43414 337 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 HMGN2P05204 90 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 CTXN2P0C2S0 81 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 NBEAP1P0C6P0 100 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 DANCRP0C864 163 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SP9P0CG40 484 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CSRP1P21291 193 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 ACRV1P26436 265 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 OR10J1P30954 320 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CCKBRP32239 447 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 LHX2P50458 406 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 CLDN6P56747 220 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SUPT4H1P63272 117 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 ZFP36L1Q07352 338 aaKnown RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 SPOCK1Q08629 439 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 EIF4EBP2Q13542 120 aaPredicted RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 ADIRFQ15847 76 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 AMMECR1LQ6DCA0 310 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SPSB3Q6PJ21 355 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 LRRC70Q7Z2Q7 622 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 TMEM173Q86WV6 379 aaPredicted RBP3.27□□□□□ -1.89
MCF2-210ENST00000536274 ZNF584Q8IVC4 421 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 D2HGDHQ8N465 521 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 EID2Q8N6I1 236 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 STPG3Q8N7X2 389 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 FAM3CQ92520 227 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 RASD2Q96D21 266 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 BPIFA2Q96DR5 249 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SLC41A2Q96JW4 573 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 SPACA5Q96QH8 159 aa3.27□□□□□ -1.89
MCF2-210ENST00000536274 RASL10BQ96S79 203 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms