RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HDAC3O15379 428 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ENTPD5O75356 428 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 LY6HO94772 140 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SEMA3DO95025 777 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 OPN1MWP04001 364 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CLPSP04118 112 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ADRA2AP08913 450 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CT62P0C5K7 136 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 P0C879 139 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 OPN1MW2P0DN77 364 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 OPN1MW3P0DN78 364 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 OR12D1P0DN82 309 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 NCF1P14598 390 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 MDKP21741 143 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ARR3P36575 388 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SLC1A2P43004 574 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 RPL8P62917 257 aaKnown RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CRADDP78560 199 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 RAB40BQ12829 278 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TGFBIQ15582 683 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TMEM176BQ3YBM2 270 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TRMT12Q53H54 448 aaKnown RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CFAP157Q5JU67 520 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SPANXN3Q5MJ09 141 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 KPRPQ5T749 579 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ANKRD22Q5VYY1 191 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 NCR3LG1Q68D85 454 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 PVRIGQ6DKI7 326 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TTC19Q6DKK2 380 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SLC25A24Q6NUK1 477 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SLC48A1Q6P1K1 146 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ZCCHC12Q6PEW1 402 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CCDC137Q6PK04 289 aaKnown RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF620Q6ZNG0 422 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 HSD17B13Q7Z5P4 300 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 MOB3BQ86TA1 216 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TPRA1Q86W33 373 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 C1orf174Q8IYL3 243 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CEP112Q8N8E3 955 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CCDC71LQ8N9Z2 235 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 OR52R1Q8NGF1 315 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 CNIH3Q8TBE1 160 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 PIGXQ8TBF5 258 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 STAG3L4Q8TBR4 150 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF675Q8TD23 568 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 MAGEE2Q8TD90 523 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ZFP90Q8TF47 636 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 RAB8BQ92930 207 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SLC38A2Q96QD8 506 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SLC35A5Q9BS91 424 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ALG12Q9BV10 488 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TM2D1Q9BX74 207 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 GPR61Q9BZJ8 451 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SELENOIQ9C0D9 397 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 DERL2Q9GZP9 239 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 AICDAQ9GZX7 198 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 RACGAP1Q9H0H5 632 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF702PQ9H963 129 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 SLC17A5Q9NRA2 495 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 UBQLN4Q9NRR5 601 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 TREM2Q9NZC2 230 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 MAT2BQ9NZL9 334 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 PDP1Q9P0J1 537 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 OPTCQ9UBM4 332 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 FBXL3Q9UKT7 428 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 KIF25-AS1Q9Y6Z4 181 aa2.39□□□□□ -2.03
SNHG1-202ENST00000535689 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
SNHG1-202ENST00000535689 A0A0A6YYD5 115 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 BTBD17A6NE02 478 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ZSCAN5BA6NJL1 495 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CLDN25C9JDP6 229 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 EIF4E2O60573 245 aaKnown RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 VAMP5O95183 116 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CLDN9O95484 217 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 PTHP01270 115 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 GYPCP04921 128 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 KLK1P06870 262 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 IFI6P09912 130 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 PRG2P13727 222 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 RPS2P15880 293 aaKnown RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 PGAM1P18669 254 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ATP6V1C1P21283 382 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 VDAC1P21796 283 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 ZBTB25P24278 435 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 COL8A2P25067 703 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 FASP25445 335 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 IL2RGP31785 369 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 GLRXP35754 106 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CRYBB2P43320 205 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 P2RX1P51575 399 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 SH3BGRP55822 239 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 GPX6P59796 221 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 CBX1P83916 185 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 BST1Q10588 318 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 IFT88Q13099 833 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 SELENBP1Q13228 472 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 DDX39BQ13838 428 aaKnown RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 SLC9A3R2Q15599 337 aa2.38□□□□□ -2.03
SNHG1-202ENST00000535689 TRIP13Q15645 432 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-202ENST00000535689 NNATQ16517 81 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms