RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RPS10P46783 165 aaKnown RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 RPL29P47914 159 aaKnown RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ARRB1P49407 418 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 GSK3BP49841 420 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 STK19P49842 368 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 F2RL1P55085 397 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 MLF1P58340 268 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ST8SIA6P61647 398 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SELENOWP63302 87 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 HIST1H3AP68431 136 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SIGLEC14Q08ET2 396 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 MLLT11Q13015 90 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ZNF154Q13106 437 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CLINT1Q14677 625 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TMEM132DQ14C87 1099 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TPSAB1Q15661 275 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CEBPEQ15744 281 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CEACAM21Q3KPI0 293 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ASPRV1Q53RT3 343 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CT45A2Q5DJT8 189 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CTSL3PQ5NE16 218 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SYPL2Q5VXT5 272 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TMEM198Q66K66 360 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SLC27A1Q6PCB7 646 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 GLDNQ6ZMI3 551 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 FRRS1Q6ZNA5 592 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SLC25A26Q70HW3 274 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ZNF546Q86UE3 836 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 LRRTM1Q86UE6 522 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ZDHHC21Q8IVQ6 265 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 C20orf196Q8IYI0 205 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CIARTQ8N365 385 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TOMM5Q8N4H5 51 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 GBGT1Q8N5D6 347 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 HJURPQ8NCD3 748 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 OR4K2Q8NGD2 314 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 OR1S2Q8NGQ3 325 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 OR1L6Q8NGR2 347 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 OLIG1Q8TAK6 271 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CNIH3Q8TBE1 160 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TMEM106AQ96A25 262 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 PINX1Q96BK5 328 aaKnown RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 LRRC58Q96CX6 371 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 C16orf58Q96GQ5 468 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 C5orf30Q96GV9 206 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ITCHQ96J02 903 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 C17orf77Q96MU5 243 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 OR4K3Q96R72 315 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 PANX1Q96RD7 426 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 PEBP4Q96S96 227 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SLC25A31Q9H0C2 315 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SRMSQ9H3Y6 488 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 GEMIN7Q9H840 131 aaKnown RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 MOB1AQ9H8S9 216 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TMEM27Q9HBJ8 222 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 ASF1BQ9NVP2 202 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TMEM38BQ9NVV0 291 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 RBM22Q9NW64 420 aaKnown RBP eCLIP3.64□□□□□ -1.832e-7■■■■■ 30.7
ITGB1-219ENST00000534049 GPATCH2LQ9NWQ4 482 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 NDUFB11Q9NX14 153 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SLC2A8Q9NY64 477 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 SPANXCQ9NY87 97 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 BET1LQ9NYM9 111 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 MTCH1Q9NZJ7 389 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 PIPOXQ9P0Z9 390 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 MARCH4Q9P2E8 410 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 CACFD1Q9UGQ2 172 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 NAT8Q9UHE5 227 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 EMCNQ9ULC0 261 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 RNF150Q9ULK6 438 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 FARSAQ9Y285 508 aaKnown RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 COL11A1P12107 1806 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-219ENST00000534049 LAMA4Q16363 1823 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 DENND4AQ7Z401 1863 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 TANC1Q9C0D5 1861 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 KIAA1217Q5T5P2 1943 aa3.64□□□□□ -1.83
ITGB1-219ENST00000534049 A0A0A6YYC8 382 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-219ENST00000534049 TRBV2A0A0J9YWF9 115 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 EDDM13A0A1B0GTR0 161 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 ANKUB1A6NFN9 424 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 ANKRD61A6NGH8 418 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 TVP23AA6NH52 213 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 OR6C76A6NM76 312 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 IFITM5A6NNB3 132 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 ZNF705GA8MUZ8 300 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-219ENST00000534049 IDSB3KWA1 339 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 B4DEV8 164 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 F5H5P2 479 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 G3V3Y1 287 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 G3V4G9 280 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 I3L1I5 382 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-219ENST00000534049 J3QR89 54 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 SDHDO14521 159 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 VCYO14598 125 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 RBFOX2O43251 390 aaKnown RBP eCLIP3.63□□□□□ -1.83
ITGB1-219ENST00000534049 GSTZ1O43708 216 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-219ENST00000534049 HIST1H2BKO60814 126 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 ZG16O60844 167 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 CDRT1O95170 752 aa3.63□□□□□ -1.83
ITGB1-219ENST00000534049 OR2C1O95371 312 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms