RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SLC9A3R2Q15599 337 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 CDCP2Q5VXM1 449 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 TMEM211Q6ICI0 200 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 RTN4RL2Q86UN3 420 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 POC1AQ8NBT0 407 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 OR2AE1Q8NHA4 323 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 GALNT14Q96FL9 552 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 SYT3Q9BQG1 590 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 ZNF2Q9BSG1 426 aaPredicted RBP10.39□□□□□ -0.75
ATM-222ENST00000533733 RNF126Q9BV68 326 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 SUCNR1Q9BXA5 334 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 LDAHQ9H6V9 325 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 TAS2R3Q9NYW6 316 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 SDK2Q58EX2 2172 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 USP34Q70CQ2 3546 aa10.39□□□□□ -0.75
ATM-222ENST00000533733 ZNF587BE7ETH6 402 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 PDCD6O75340 191 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 FCGR3AP08637 254 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 HOXD4P09016 255 aaPredicted RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 GLRA1P23415 457 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 MALLQ13021 153 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 AIMP2Q13155 320 aaKnown RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 RNPS1Q15287 305 aaKnown RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 ANKRD55Q3KP44 614 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 CCDC157Q569K6 752 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 NKAPLQ5M9Q1 402 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 ELP2Q6IA86 826 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 Q6ZS49 121 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 SKA3Q8IX90 412 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 LRTM2Q8N967 370 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 AKR7LQ8NHP1 331 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 FNDC9Q8TBE3 224 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 WDR13Q9H1Z4 485 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 TMEM100Q9NV29 134 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 TUBD1Q9UJT1 453 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 C9orf172C9J069 976 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 NEURL1O76050 574 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 NTF4P34130 210 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 ARR3P36575 388 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 GLP1RP43220 463 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 LHX2P50458 406 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 HGFACQ04756 655 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 FAM185AQ8N0U4 392 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 CCDC71LQ8N9Z2 235 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 RELL2Q8NC24 303 aaPredicted RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 SAT2Q96F10 170 aaPredicted RBP10.38□□□□□ -0.75
ATM-222ENST00000533733 FAM86C1Q9NVL1 165 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 AK3Q9UIJ7 227 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 GPR160Q9UJ42 338 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 PRUNE2Q8WUY3 3088 aa10.38□□□□□ -0.75
ATM-222ENST00000533733 A0A0C4DFX4 3053 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 IGKV1-27A0A075B6S5 117 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ZNF850A8MQ14 1090 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ZNF728P0DKX0 622 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ZNF708P17019 499 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 FUT3P21217 361 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 PTGER4P35408 488 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 CLDN18P56856 261 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 SRPXP78539 464 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ZNF92Q03936 586 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 TAF9Q16594 264 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 PABPC1L2AQ5JQF8 200 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 LINC00596Q86U02 117 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 TMEM200AQ86VY9 491 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 SLC38A6Q8IZM9 456 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ARL11Q969Q4 196 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 APOBEC3DQ96AK3 386 aaPredicted RBP10.37□□□□□ -0.75
ATM-222ENST00000533733 ZNF775Q96BV0 537 aaPredicted RBP10.37□□□□□ -0.75
ATM-222ENST00000533733 FER1L6-AS2Q96M78 137 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ZNF75AQ96N20 296 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ARRDC1-AS1Q9H2J1 176 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 PLEKHA2Q9HB19 425 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 C12orf4Q9NQ89 552 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 ST3GAL6Q9Y274 331 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 KLF13Q9Y2Y9 288 aaPredicted RBP10.37□□□□□ -0.75
ATM-222ENST00000533733 PCSK5Q92824 1860 aa10.37□□□□□ -0.75
ATM-222ENST00000533733 H0YIZ8 118 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 SPRY1O43609 319 aaPredicted RBP10.36□□□□□ -0.75
ATM-222ENST00000533733 ADAP1O75689 374 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 ACTL6AO96019 429 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 GAPDHP04406 335 aaKnown RBP10.36□□□□□ -0.75
ATM-222ENST00000533733 RBM11P57052 281 aaKnown RBP10.36□□□□□ -0.75
ATM-222ENST00000533733 ABCA11PQ4W5N1 156 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 BEX5Q5H9J7 111 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 TSPO2Q5TGU0 170 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 TFAP2EQ6VUC0 442 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 IL34Q6ZMJ4 242 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 DTX1Q86Y01 620 aa10.36□□□□□ -0.75
ATM-222ENST00000533733 OR10AD1Q8NGE0 317 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms