RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 BEX1Q9HBH7 125 aa8.56□□□□□ -1.04
CAPN1-225ENST00000533704 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
CAPN1-225ENST00000533704 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
CAPN1-225ENST00000533704 GMPPBQ9Y5P6 360 aa8.56□□□□□ -1.04
CAPN1-225ENST00000533704 MEX3AA1L020 520 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 DHRS7CA6NNS2 312 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 M0R1W7 72 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 GATBO75879 557 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 SERPINA3P01011 423 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 UBCP0CG48 685 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 SAA4P35542 130 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 IER3P46695 156 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 POU3F4P49335 361 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 RPL31P62899 125 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 ACTC1P68032 377 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 ACTA1P68133 377 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 SRSF4Q08170 494 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 UBE2V2Q15819 145 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 NCR3LG1Q68D85 454 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 METAP1DQ6UB28 335 aaPredicted RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 C17orf107Q6ZR85 190 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 LDLRAD3Q86YD5 345 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 ZNF561Q8N587 486 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 ASCC1Q8N9N2 400 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 TRUB1Q8WWH5 349 aaKnown RBP8.55□□□□□ -1.04
CAPN1-225ENST00000533704 DYRK2Q92630 601 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 BORCS8Q96FH0 119 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 HRASLS5Q96KN8 279 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 MBOAT4Q96T53 435 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 NRIP2Q9BQI9 281 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 PKIBQ9C010 78 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 WNK1Q9H4A3 2382 aa8.55□□□□□ -1.04
CAPN1-225ENST00000533704 IGKV1-27A0A075B6S5 117 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 A0A1W2PPH5 198 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 SNTNA6NMZ2 147 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 J3QLW9 94 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 EBAG9O00559 213 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 SLC16A6O15403 523 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 NOS1APO75052 506 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 BAG2O95816 211 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 HTR1AP08908 422 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 OCM2P0CE71 109 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 OCMP0CE72 109 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 CCL3L1P16619 93 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 ZNF19P17023 458 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 ZNF20P17024 532 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 COX7A1P24310 79 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 MPZP25189 248 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 UBE2E1P51965 193 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 FUT6P51993 359 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 SNU13P55769 128 aaKnown RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 OR12D2P58182 307 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 SNRPGP62308 76 aaKnown RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 RELBQ01201 579 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 COL10A1Q03692 680 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 IL24Q13007 206 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 CNN3Q15417 329 aaKnown RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 TAF9Q16594 264 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 MEDAGQ5VYS4 303 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 OLFML2AQ68BL7 652 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 DHRS7BQ6IAN0 325 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 ZNF782Q6ZMW2 699 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 Q6ZSR3 168 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 SLC25A26Q70HW3 274 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 MKXQ8IYA7 352 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 OR5D13Q8NGL4 314 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 OR2G2Q8NGZ5 317 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 TNFRSF14Q92956 283 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 EMG1Q92979 244 aaKnown RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 FGGYQ96C11 551 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 CEP19Q96LK0 163 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 CHST5Q9GZS9 411 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
CAPN1-225ENST00000533704 SF3B6Q9Y3B4 125 aaKnown RBP8.54□□□□□ -1.04
CAPN1-225ENST00000533704 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 A0A1B0GUS0 222 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 CLPSL1A2RUU4 121 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 F8VVB4 439 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 F8VWA3 439 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 NDUFA7O95182 113 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 CYB5AP00167 134 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 TK1P04183 234 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 CALCBP10092 127 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 PAX6P26367 422 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ATP1B3P54709 279 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 EDDM3BP56851 147 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ERVFRD-1P60508 538 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ISL1P61371 349 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ZNF91Q05481 1191 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 OCLNQ16625 522 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 TMEM244Q5VVB8 128 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 TMEM200BQ69YZ2 307 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 BRICD5Q6PL45 260 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 GDPGP1Q6ZNW5 385 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ZBTB49Q6ZSB9 765 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 C1orf122Q6ZSJ8 110 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 LHFPL3Q86UP9 236 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 EGFL6Q8IUX8 553 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ACBD7Q8N6N7 88 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms