RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 C19orf12Q9NSK7 152 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 hCG_1809904A0A1W2PP81 198 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 A0A1W2PPE2 198 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 A0A1W2PR64 198 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 A0A1W2PRV1 198 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 ANGPTL7O43827 346 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
CPSF1-211ENST00000533492 CEBPDP49716 269 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-211ENST00000533492 SRSF4Q08170 494 aaKnown RBP12.63□□□□□ -0.39
CPSF1-211ENST00000533492 TAF9Q16594 264 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-211ENST00000533492 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 OR4M1Q8NGD0 313 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 LINC01006Q8NI28 216 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 TRUB1Q8WWH5 349 aaKnown RBP12.63□□□□□ -0.39
CPSF1-211ENST00000533492 PKIBQ9C010 78 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 GNG8Q9UK08 70 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 VPREB3Q9UKI3 123 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 PKD1L1Q8TDX9 2849 aa12.63□□□□□ -0.39
CPSF1-211ENST00000533492 MPZP25189 248 aa12.62□□□□□ -0.39
CPSF1-211ENST00000533492 TGFBR2P37173 567 aa12.62□□□□□ -0.39
CPSF1-211ENST00000533492 FUT6P51993 359 aa12.62□□□□□ -0.39
CPSF1-211ENST00000533492 IL24Q13007 206 aa12.62□□□□□ -0.39
CPSF1-211ENST00000533492 TMEM200BQ69YZ2 307 aa12.62□□□□□ -0.39
CPSF1-211ENST00000533492 ZSCAN4Q8NAM6 433 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-211ENST00000533492 HEXA-AS1Q9H8Q6 139 aa12.62□□□□□ -0.39
CPSF1-211ENST00000533492 INMTO95050 263 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 TK1P04183 234 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 ZNF85Q03923 595 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 UBE2V2Q15819 145 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 MIDNQ504T8 468 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 TP53I3Q53FA7 332 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 Q6ZSV7 163 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 PRSS35Q8N3Z0 413 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 ASCC1Q8N9N2 400 aaKnown RBP12.61□□□□□ -0.39
CPSF1-211ENST00000533492 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 UBE2FQ969M7 185 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 HES4Q9HCC6 221 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 USE1Q9NZ43 259 aa12.61□□□□□ -0.39
CPSF1-211ENST00000533492 DAPL1A0PJW8 107 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 EI24O14681 340 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 TIMM23O14925 209 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ENTPD6O75354 484 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ALPLP05186 524 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 CHRM2P08172 466 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 UBCP0CG48 685 aaKnown RBP12.6□□□□□ -0.39
CPSF1-211ENST00000533492 LGALS4P56470 323 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ERVK11-1P61568 191 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ACTC1P68032 377 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ACTA1P68133 377 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 COL10A1Q03692 680 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ZIK1Q3SY52 487 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-211ENST00000533492 TMEM244Q5VVB8 128 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 HCP5Q6MZN7 132 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 ZFP1Q6P2D0 407 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 CCDC121Q6ZUS5 278 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 KCTD20Q7Z5Y7 419 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 EGFL6Q8IUX8 553 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 RDH10Q8IZV5 341 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 C10orf35Q96D05 121 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 RNFT2Q96EX2 444 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 HRASLS5Q96KN8 279 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 SSX3Q99909 188 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 CITED1Q99966 193 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 CHST5Q9GZS9 411 aa12.6□□□□□ -0.39
CPSF1-211ENST00000533492 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 SNTNA6NMZ2 147 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 H3BUX3 64 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 K7N7A8 449 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 M0QZ24 198 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 CLPXO76031 633 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 CYB5AP00167 134 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 PIPP12273 146 aaPredicted RBP12.59□□□□□ -0.39
CPSF1-211ENST00000533492 CCL3L1P16619 93 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 ALDH3A2P51648 485 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 ATP1B3P54709 279 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
CPSF1-211ENST00000533492 MEDAGQ5VYS4 303 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 SLC25A26Q70HW3 274 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 GDPD3Q7L5L3 318 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 SLAMF9Q96A28 289 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 MTCH1Q9NZJ7 389 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
CPSF1-211ENST00000533492 IGKV1-27A0A075B6S5 117 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 TSPAN9O75954 239 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 OCM2P0CE71 109 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 OCMP0CE72 109 aaPredicted RBP12.58□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF20P17024 532 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 COX7A1P24310 79 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms