RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 IGHV3-9P01782 118 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 EDN3P14138 238 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 FUT6P51993 359 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 ARF1P84077 181 aaKnown RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 CYCSP99999 105 aaKnown RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 RPUSD3Q6P087 351 aaKnown RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 LINC00696Q6ZRV3 163 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 STPG2Q8N412 459 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 CPEB3Q8NE35 698 aaKnown RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 LDAHQ9H6V9 325 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 PLA2G3Q9NZ20 509 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 GPR160Q9UJ42 338 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 EDARQ9UNE0 448 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 ZNF816-ZNF321PA0A0X1KG74 233 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 PSMB6P28072 239 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 ECI1P42126 302 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 HES3Q5TGS1 186 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 DHRS13Q6UX07 377 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 COLCA1Q6ZS62 124 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 TMEM251Q8N6I4 163 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 ZSCAN4Q8NAM6 433 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 MRPS24Q96EL2 167 aaKnown RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 WDR13Q9H1Z4 485 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 BARX1Q9HBU1 254 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 CHMP1AQ9HD42 196 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-215ENST00000533476 MBD2Q9UBB5 411 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 IL17BQ9UHF5 180 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 SLC7A11Q9UPY5 501 aa16.72■□□□□ 0.27
UBXN1-215ENST00000533476 IGKV1D-8A0A087WSZ0 117 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 TRBV6-7A0A0A0MS04 114 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 PLATP00750 562 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 PI3P19957 117 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 ATXN7L3Q14CW9 347 aaPredicted RBP16.71■□□□□ 0.27
UBXN1-215ENST00000533476 SLC9A3R2Q15599 337 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 PXDC1Q5TGL8 231 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.71■□□□□ 0.27
UBXN1-215ENST00000533476 RNF122Q9H9V4 155 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 R4GN57 208 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 GPR179Q6PRD1 2367 aa16.71■□□□□ 0.27
UBXN1-215ENST00000533476 C13orf42A0A1B0GVH6 325 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 ZNF724A8MTY0 619 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 ZNF587BE7ETH6 402 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 LGALS8O00214 317 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 MSTNO14793 375 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 TNFSF15O95150 251 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 RPS2P15880 293 aaKnown RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 DTYMKP23919 212 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 CHATP28329 748 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 PLGLB1Q02325 96 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 TAF9Q16594 264 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 TUSC5Q8IXB3 177 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 INO80EQ8NBZ0 244 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 RELL2Q8NC24 303 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 HDHD3Q9BSH5 251 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 BCO1Q9HAY6 547 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 AK3Q9UIJ7 227 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 IGKV1-12A0A0C4DH73 117 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 NME2P1O60361 137 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 IGKV1D-12P01611 117 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 NME2P22392 152 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 GLRA1P23415 457 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 LUMP51884 338 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 PDZK1IP1Q13113 114 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 ANKRD55Q3KP44 614 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 PAN3Q58A45 887 aaKnown RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 PLCXD3Q63HM9 321 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 MDS2Q8NDY4 140 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 FER1L6-AS2Q96M78 137 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 FAAP24Q9BTP7 215 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 COQ3Q9NZJ6 369 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 ANXA10Q9UJ72 324 aa16.7■□□□□ 0.26
UBXN1-215ENST00000533476 KLF13Q9Y2Y9 288 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-215ENST00000533476 SP1P08047 785 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 OSR2Q8N2R0 312 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 STOML3Q8TAV4 291 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 FNDC9Q8TBE3 224 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 ARPC5LQ9BPX5 153 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 ZNF471Q9BX82 626 aaPredicted RBP16.69■□□□□ 0.26
UBXN1-215ENST00000533476 CALHM2Q9HA72 323 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 TMEM9BQ9NQ34 198 aa16.69■□□□□ 0.26
UBXN1-215ENST00000533476 C14orf166Q9Y224 244 aaKnown RBP16.69■□□□□ 0.26
UBXN1-215ENST00000533476 GALR2O43603 387 aaPredicted RBP16.68■□□□□ 0.26
UBXN1-215ENST00000533476 ZNF806P0C7X5 589 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 COX5BP10606 129 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 PGAM2P15259 253 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 MEOX1P50221 254 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 BTN1A1Q13410 526 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 SNTB1Q13884 538 aaKnown RBP16.68■□□□□ 0.26
UBXN1-215ENST00000533476 CCDC36Q8IYA8 594 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 PIGCQ92535 297 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 PCDHB16Q9NRJ7 776 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 CSAG2Q9Y5P2 127 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 AHCTF1Q8WYP5 2266 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 F8VVB4 439 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 F8VWA3 439 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 NAAAQ02083 359 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 ZNF273Q14593 569 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 UQCC3Q6UW78 93 aa16.68■□□□□ 0.26
UBXN1-215ENST00000533476 CMSS1Q9BQ75 279 aaKnown RBP16.68■□□□□ 0.26
UBXN1-215ENST00000533476 SULT4A1Q9BR01 284 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms