RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZNF83P51522 516 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 TOR2AQ5JU69 321 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 STEAP1BQ6NZ63 245 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 C12orf54Q6X4T0 127 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 GPAT4Q86UL3 456 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF100Q8IYN0 542 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF454Q8N9F8 522 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 OR6N1Q8NGY5 312 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 FAM46BQ96A09 425 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 MSI2Q96DH6 328 aaKnown RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SLAMF6Q96DU3 332 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ELMOD3Q96FG2 381 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 MED30Q96HR3 178 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 PIMREGQ9BSJ6 248 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 C1QTNF6Q9BXI9 259 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 PTTG3PQ9NZH4 202 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 OPN4Q9UHM6 478 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 TMA7Q9Y2S6 64 aaKnown RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SLC25A15Q9Y619 301 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 IGHV3-15A0A0B4J1V0 119 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 LOC390937A0A1W2PQ73 354 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 LINC00862A6NCI5 91 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 A6NIZ1 184 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF208O43345 1280 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 CD2P06729 351 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 CSF1P09603 554 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 H2BFMP0C1H6 154 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF735P0CB33 412 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 AKAIN1P0CW23 69 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 PGA4P0DJD7 388 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 PGA3P0DJD8 388 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF35P13682 527 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF250P15622 560 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 RAP1BP61224 184 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 RAP1AP62834 184 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 SLC25A53Q5H9E4 307 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 GLT8D1Q68CQ7 371 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 C5orf46Q6UWT4 87 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF813Q6ZN06 617 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 GVQW1Q8N7I0 195 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR6M1Q8NGM8 313 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR1J2Q8NGS2 313 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 MRGPRFQ96AM1 343 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 DDIT4LQ96D03 193 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 MRGPRX4Q96LA9 322 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR5B2Q96R09 309 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 MYOZ1Q9NP98 299 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-207ENST00000533242 AUP1Q9Y679 476 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ATP23Q9Y6H3 246 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 CUBNO60494 3623 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 DYSFO75923 2080 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 HEATR1Q9H583 2144 aaKnown RBP7.05□□□□□ -1.28
NEDD8-207ENST00000533242 A0A1B0GTI1 187 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 A0A1W2PPL8 197 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 SNRPGP15A8MWD9 76 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 RAB27BO00194 218 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 GOSR2O14653 212 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 RER1O15258 196 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 SCO1O75880 301 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 CSN2P05814 226 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 GIPP09681 153 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ACHEP22303 614 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 APOBEC3AP31941 199 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-207ENST00000533242 MMP16P51512 607 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 QRFPP83859 136 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 DHODHQ02127 395 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OPCMLQ14982 345 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ESCO2Q56NI9 601 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 C1orf100Q5SVJ3 147 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 FBXW9Q5XUX1 488 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR52W1Q6IF63 320 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR2AK2Q8NG84 335 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR13C8Q8NGS7 320 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 OR6S1Q8NH40 331 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 PBOV1Q9GZY1 135 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 POFUT1Q9H488 388 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 CKLFQ9UBR5 152 aa7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF230Q9UIE0 474 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-207ENST00000533242 ANK2Q01484 3957 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 NPIPB13A6NJU9 1138 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 NPIPB4C9JG80 1138 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 MCRIP1C9JLW8 97 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 M0R1B8 84 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 M0R233 179 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 RAD51DO75771 328 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 TPPPO94811 219 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 LPLP06858 475 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 PRKXP51817 358 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 IKZF1Q13422 519 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 NKPD1Q17RQ9 610 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 CR1LQ2VPA4 569 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 FAM209AQ5JX71 171 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 LY6G6FQ5SQ64 297 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 IDO2Q6ZQW0 420 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 OR13C9Q8NGT0 318 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 OR51E1Q8TCB6 317 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 C15orf40Q8WUR7 153 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 NUDCD2Q8WVJ2 157 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 SLC6A7Q99884 636 aa7.04□□□□□ -1.28
NEDD8-207ENST00000533242 NICN1Q9BSH3 213 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms