RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 POFUT1Q9H488 388 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 DECR2Q9NUI1 292 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 TAS2R4Q9NYW5 299 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 CCDC59Q9P031 241 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF391Q9UJN7 358 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 FOXJ3Q9UPW0 622 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 AK6Q9Y3D8 172 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 PDCD5O14737 125 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 DHRS3O75911 302 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 TSPAN15O95858 294 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 MAS1P04201 325 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 FAM157BP0CG42 384 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 IGFBP3P17936 291 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 RAB3BP20337 219 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 CFL1P23528 166 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 SOX6P35712 828 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 GNALP38405 381 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 DDOSTP39656 456 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 MAP2K3P46734 347 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 GSK3AP49840 483 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 UCP2P55851 309 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR10A3P58181 314 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 FAM3AP98173 230 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 RIPPLY1Q0D2K3 151 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 HNRNPA0Q13151 305 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 NR2C2APQ86WQ0 139 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 SERPINA12Q8IW75 414 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF101Q8IZC7 436 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR5D14Q8NGL3 314 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 GFI1Q99684 422 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 SLIRPQ9GZT3 109 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZCCHC4Q9H5U6 513 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 FZR1Q9UM11 496 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 PIGLQ9Y2B2 252 aa9.46□□□□□ -0.9
TRAPPC4-213ENST00000533149 hCG_38984A0A1B0GV85 526 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 HOXA3O43365 443 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 TPD52L2O43399 206 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 ICMTO60725 284 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 FSTP19883 344 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 ACKR3P25106 362 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 PRSS12P56730 875 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 LOXL3P58215 753 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 PPP1CBP62140 327 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 GK2Q14410 553 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 FAM189A2Q15884 450 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 C2orf68Q2NKX9 166 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 ALKBH6Q3KRA9 238 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF404Q494X3 552 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 RFPL4BQ6ZWI9 263 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 PGAP1Q75T13 922 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 MRPL21Q7Z2W9 205 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR1M1Q8NGA1 313 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 MCFD2Q8NI22 146 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 GTF3AQ92664 365 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 NXF2Q9GZY0 626 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 MMP26Q9NRE1 261 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 C1RLQ9NZP8 487 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 TAAR3PQ9P1P4 343 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 CKLFQ9UBR5 152 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 POLR3KQ9Y2Y1 108 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 RNF114Q9Y508 228 aa9.45□□□□□ -0.9
TRAPPC4-213ENST00000533149 RYR3Q15413 4870 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 A0A075B6Q4 140 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 ISPDA4D126 451 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 MEGF11A6BM72 1044 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 GGT3PA6NGU5 568 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 DHRS7CA6NNS2 312 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 NOTOA8MTQ0 251 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 SRRM5B3KS81 715 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 J3QW42 95 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 CLPXO76031 633 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 FAHP16930 419 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 RAB3AP20336 220 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 PSMD7P51665 324 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 PPP3R1P63098 170 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 LSAMPQ13449 338 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 MOGQ16653 247 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 FAM209AQ5JX71 171 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 SPATA46Q5T0L3 261 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 IDNKQ5T6J7 187 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 RGS7BPQ6MZT1 257 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 DNAAF1Q8NEP3 725 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR51A2Q8NGJ7 313 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR1J1Q8NGS3 322 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 SLC25A40Q8TBP6 338 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 ITFG2Q969R8 447 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 C10orf35Q96D05 121 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 CMBLQ96DG6 245 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 ELMOD3Q96FG2 381 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 OPA3Q9H6K4 179 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 SAP30LQ9HAJ7 183 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 PLEKHA1Q9HB21 404 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 A3GALT2U3KPV4 340 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms