RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 NESP48681 1621 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 TOP2BQ02880 1626 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 BRWD3Q6RI45 1802 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 IGKV2D-24A0A075B6R9 120 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 LOC102724200A0A096LPH7 203 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 IGHV1-3A0A0C4DH29 117 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 IGKV1-6A0A0C4DH72 117 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 CENPVL3A0A0U1RRI6 287 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 SGCEO43556 437 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 LDOC1O95751 146 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 NELFEP18615 380 aaKnown RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 SYT1P21579 422 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 TGFBR1P36897 503 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 MAGEA6P43360 314 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 AQP5P55064 265 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 OR10A3P58181 314 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 TSPAN5P62079 268 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 PPP1CAP62136 330 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 ADIGQ0VDE8 80 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 ZNF816Q0VGE8 651 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 STX4Q12846 297 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 MOBPQ13875 183 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 C5orf47Q569G3 176 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 IDNKQ5T6J7 187 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 AP1ARQ63HQ0 302 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 CLEC6AQ6EIG7 209 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 BHLHA15Q7RTS1 189 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 SSX6Q7RTT6 188 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 CCNYL1Q8N7R7 359 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 OR2Z1Q8NG97 314 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 OR2L8Q8NGY9 312 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 OR51Q1Q8NH59 317 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 UBA3Q8TBC4 463 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 HGDQ93099 445 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 MRPL48Q96GC5 212 aaKnown RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 ZNF396Q96N95 335 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 RILPQ96NA2 401 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 ZFP3Q96NJ6 502 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 METTL26Q96S19 204 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 VAT1Q99536 393 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 BBS2Q9BXC9 721 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 ZSCAN16Q9H4T2 348 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 WDR55Q9H6Y2 383 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 FBXO6Q9NRD1 293 aaPredicted RBP1.75□□□□□ -2.13
CD44-234ENST00000531873 PRO0628Q9UI54 55 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 CBY1Q9Y3M2 126 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 TICRRQ7Z2Z1 1910 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 UNC79Q9P2D8 2635 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 PLXNB3Q9ULL4 1909 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 CEP164Q9UPV0 1460 aa1.75□□□□□ -2.13
CD44-234ENST00000531873 YEATS2Q9ULM3 1422 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 PRR14LQ5THK1 2151 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 NACADO15069 1562 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 PCF11O94913 1555 aaKnown RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 A0A1B0GXF2 115 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 TMEM72A0PK05 275 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ERICH2A1L162 156 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 LRCOL1A6NCL2 159 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 COLCA2A8K830 154 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 CENPBD1B2RD01 187 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 MKRN2OSH3BPM6 223 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 M0QXV9 152 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 CYB5R3P00387 301 aaPredicted RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 CD28P10747 220 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 HLA-GP17693 338 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 M6PRP20645 277 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 NPY1RP25929 384 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 TEAD1P28347 426 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 GTF2H1P32780 548 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 UGT2B10P36537 528 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 PSMB2P49721 201 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 RAB38P57729 211 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 TAS2R43P59537 309 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 DSTNP60981 165 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 RPL10AP62906 217 aaKnown RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 SLAMF1Q13291 335 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 PMS2P3Q13401 168 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 EIF4EBP1Q13541 118 aaPredicted RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 DMC1Q14565 340 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ANGPT1Q15389 498 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 SP6Q3SY56 376 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ZNF404Q494X3 552 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 LUZP6Q538Z0 58 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 PDPK2PQ6A1A2 396 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ZNF880Q6PDB4 577 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 SHISA6Q6ZSJ9 500 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 SLC35G3Q8N808 338 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 OR5M1Q8NGP8 315 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 CLHC1Q8NHS4 586 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ZNF420Q8TAQ5 688 aaPredicted RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 RORBQ92753 470 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ZMYND19Q96E35 227 aaPredicted RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 QKIQ96PU8 341 aaKnown RBP eCLIP1.74□□□□□ -2.13
CD44-234ENST00000531873 CYTH2Q99418 400 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 MARVELD1Q9BSK0 173 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 NXF2Q9GZY0 626 aaKnown RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 ASB7Q9H672 318 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 NLE1Q9NVX2 485 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms