RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 CMSS1Q9BQ75 279 aaKnown RBP14.63□□□□□ -0.07
VPS26B-206ENST00000531741 FAAP24Q9BTP7 215 aa14.63□□□□□ -0.07
VPS26B-206ENST00000531741 NKX6-2Q9C056 277 aaPredicted RBP14.63□□□□□ -0.07
VPS26B-206ENST00000531741 GPR35Q9HC97 309 aa14.63□□□□□ -0.07
VPS26B-206ENST00000531741 PCDHB16Q9NRJ7 776 aa14.63□□□□□ -0.07
VPS26B-206ENST00000531741 LPAR3Q9UBY5 353 aa14.63□□□□□ -0.07
VPS26B-206ENST00000531741 ATPIF1Q9UII2 106 aa14.63□□□□□ -0.07
VPS26B-206ENST00000531741 SDK2Q58EX2 2172 aa14.63□□□□□ -0.07
VPS26B-206ENST00000531741 LINC01387J3KSC0 135 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF708P17019 499 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 CTRB1P17538 263 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 OTX2P32243 289 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 PMELP40967 661 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 RGS19P49795 217 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 GFRA1P56159 465 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 CLDN15P56746 228 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 FAM3AP98173 230 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 DEFA5Q01523 94 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 IAH1Q2TAA2 248 aaPredicted RBP14.62□□□□□ -0.07
VPS26B-206ENST00000531741 CEACAM16Q2WEN9 425 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 CTRB2Q6GPI1 263 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 AKR7LQ8NHP1 331 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 FNDC9Q8TBE3 224 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 SPSB4Q96A44 273 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 GALNT14Q96FL9 552 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 NARS2Q96I59 477 aaKnown RBP14.62□□□□□ -0.07
VPS26B-206ENST00000531741 BCO1Q9HAY6 547 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 GSKIPQ9P0R6 139 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 RTTNQ86VV8 2226 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 TOR1AO14656 332 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 XRCC2O43543 280 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 IFNA21P01568 189 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 HKR1P10072 659 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 FAM122CQ6P4D5 195 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 OSR2Q8N2R0 312 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 ESX1Q8N693 406 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 SMIM8Q96KF7 97 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 SULT4A1Q9BR01 284 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 ZPBPQ9BS86 351 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 ZC4H2Q9NQZ6 224 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 SLC7A11Q9UPY5 501 aa14.62□□□□□ -0.07
VPS26B-206ENST00000531741 DEDDO75618 318 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 ACTL6AO96019 429 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 PDGFBP01127 241 aaPredicted RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 GAPDHP04406 335 aaKnown RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 SFTPBP07988 381 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 CYB561P49447 251 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 S100A10P60903 97 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 RPS18P62269 152 aaKnown RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 PDZK1IP1Q13113 114 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 WIPI1Q5MNZ9 446 aaPredicted RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 C6orf15Q6UXA7 325 aaPredicted RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 SVBPQ8N300 66 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 LRTM2Q8N967 370 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 OR10AD1Q8NGE0 317 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 OR5T2Q8NGG2 359 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 LIME1Q9H400 295 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 ACKR4Q9NPB9 350 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 DEPPQ9NTK1 212 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 IGKV1-12A0A0C4DH73 117 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF816-ZNF321PA0A0X1KG74 233 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 ABCD4O14678 606 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 IGKV1D-12P01611 117 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 MMP7P09237 267 aaPredicted RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF92Q03936 586 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 MST1LQ2TV78 715 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 PDSS1Q5T2R2 415 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 C1QTNF5Q9BXJ0 243 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 PRDM14Q9GZV8 571 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 CARHSP1Q9Y2V2 147 aaKnown RBP14.61□□□□□ -0.07
VPS26B-206ENST00000531741 KCNIP3Q9Y2W7 256 aa14.61□□□□□ -0.07
VPS26B-206ENST00000531741 IGKV3D-15A0A087WSY6 115 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF728P0DKX0 622 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 TCN2P20062 427 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 UCP3P55916 312 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 PIGPP57054 158 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 PJVKQ0ZLH3 352 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 FOXO1Q12778 655 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 PABPC1L2AQ5JQF8 200 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 GGNBP1Q5YKI7 109 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 TMEM200AQ86VY9 491 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 SKA3Q8IX90 412 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 CLRN3Q8NCR9 226 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 CT55Q8WUE5 264 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 NAA60Q9H7X0 242 aa14.6□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF629Q9UEG4 869 aaPredicted RBP14.6□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF850A8MQ14 1090 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 GEMIN2O14893 280 aaKnown RBP14.59□□□□□ -0.07
VPS26B-206ENST00000531741 TRAPPC6AO75865 159 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 FARS2O95363 451 aaKnown RBP14.59□□□□□ -0.07
VPS26B-206ENST00000531741 CST4P01036 141 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 PATE4P0C8F1 98 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 GDF1P27539 372 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 RRADP55042 308 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 SPEM2Q0P670 501 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 SMCO1Q147U7 214 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 ZNF169Q14929 603 aaPredicted RBP14.59□□□□□ -0.07
VPS26B-206ENST00000531741 COLCA1Q6ZS62 124 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 FGFBP3Q8TAT2 258 aa14.59□□□□□ -0.07
VPS26B-206ENST00000531741 TSNAXQ99598 290 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms