RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 LY6G6CO95867 125 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 RENP00797 406 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ANXA2P07355 339 aaKnown RBP6.41□□□□□ -1.38
CD44-232ENST00000531118 IGHV4-30-4P0DP06 118 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ACKR3P25106 362 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 HTR1DP28221 377 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 YAP1P46937 504 aaKnown RBP6.41□□□□□ -1.38
CD44-232ENST00000531118 CX3CR1P49238 355 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 GPM6AP51674 278 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ARHGDIBP52566 201 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 KIR3DS1Q14943 382 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 KRT72Q14CN4 511 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 SNCBQ16143 134 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 SRSF7Q16629 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
CD44-232ENST00000531118 AGKQ53H12 422 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 FAM76BQ5HYJ3 339 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 TBPL2Q6SJ96 375 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 DPY19L2P2Q6ZN68 376 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 DCXRQ7Z4W1 244 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ZBTB46Q86UZ6 589 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ZDHHC23Q8IYP9 409 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 RNF113BQ8IZP6 322 aaKnown RBP6.41□□□□□ -1.38
CD44-232ENST00000531118 STPG2Q8N412 459 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 FTMTQ8N4E7 242 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ZNF676Q8N7Q3 588 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 RNF170Q96K19 258 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ZNF714Q96N38 554 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 FNDC11Q9BVV2 318 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 NKIRAS1Q9NYS0 192 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 HHLA2Q9UM44 414 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 COMMD3-BMI1R4GMX3 469 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 TVP23AA6NH52 213 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 CCRL2O00421 344 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 FFAR1O14842 300 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 CST4P01036 141 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 TK1P04183 234 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 CFL1P23528 166 aaKnown RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 RPL11P62913 178 aaKnown RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 EIF2B1Q14232 305 aaKnown RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 TAF13Q15543 124 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 CYBRD1Q53TN4 286 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 CXorf66Q5JRM2 361 aaPredicted RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 ASPHD1Q5U4P2 390 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 SMARCD3Q6STE5 483 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 SLC35E3Q7Z769 313 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 ZNF429Q86V71 674 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 DRAM1Q8N682 238 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 C5orf56Q8N8D9 126 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 ANKRD42Q8N9B4 389 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 POC1AQ8NBT0 407 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 FANK1Q8TC84 345 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 C4orf3Q8WVX3 66 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 AQP3Q92482 292 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 STMN2Q93045 179 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 SGK3Q96BR1 496 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 SLAMF6Q96DU3 332 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 ZNF488Q96MN9 340 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 ERMAPQ96PL5 475 aaPredicted RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 OR8B4Q96RC9 309 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 NSRP1Q9H0G5 558 aaKnown RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 TMEM133Q9H2Q1 129 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 OR51I2Q9H344 312 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 ARGLU1Q9NWB6 273 aaPredicted RBP6.4□□□□□ -1.38
CD44-232ENST00000531118 DPM3Q9P2X0 92 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 SNX13Q9Y5W8 968 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 HERC1Q15751 4861 aa6.4□□□□□ -1.38
CD44-232ENST00000531118 OR6C68A6NDL8 312 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 SAP30O75446 220 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 IFNA14P01570 189 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 IFNA6P05013 189 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 SPARCP09486 303 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 HIST1H1CP16403 213 aaKnown RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 PRDX2P32119 198 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 PYCR1P32322 319 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 CDX1P47902 265 aaPredicted RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 POU3F4P49335 361 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 EDDM3BP56851 147 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 GRB2P62993 217 aaKnown RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 GNG3P63215 75 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 TNFAIP8L3Q5GJ75 292 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 NANOGP8Q6NSW7 305 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 TEX38Q6PEX7 206 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 HAGHLQ6PII5 290 aaPredicted RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 EPGNQ6UW88 154 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 ZBTB49Q6ZSB9 765 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 FAM57BQ71RH2 274 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 PRSS45Q7RTY3 260 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 LYPD6Q86Y78 171 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 FOXRED2Q8IWF2 684 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 Q8N1Y9 231 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 LINC00471Q8N535 108 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 RPP25LQ8N5L8 163 aaKnown RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 ASCC1Q8N9N2 400 aaKnown RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 OR4K13Q8NH42 304 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 PIGCQ92535 297 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 TPD52L3Q96J77 140 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 TMEM120AQ9BXJ8 343 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 OR10A2Q9H208 303 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 RETNQ9HD89 108 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms