RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 NDUFS5O43920 106 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 SMC2O95347 1197 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 TTC4O95801 387 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 UBCP0CG48 685 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 MTPNP58546 118 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 TAS2R39P59534 338 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 ATP6V0D1P61421 351 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 SLC35A1P78382 337 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 BEX5Q5H9J7 111 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 ZNF322Q6U7Q0 402 aaPredicted RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 Q6ZRU5 148 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 Q6ZSA8 131 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 BZW1Q7L1Q6 419 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 EIF3MQ7L2H7 374 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 TCF23Q7RTU1 214 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 MSRB3Q8IXL7 192 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 BPIFB6Q8NFQ5 453 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 APOBEC3DQ96AK3 386 aaPredicted RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 UBE2WQ96B02 151 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 C9orf72Q96LT7 481 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 OPALINQ96PE5 141 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 GABRG3Q99928 467 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 MTG1Q9BT17 334 aaPredicted RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 FAM192AQ9GZU8 254 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 NAA50Q9GZZ1 169 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 MRPS30Q9NP92 439 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 MRPL16Q9NX20 251 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 U3KQK5 164 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 YLPM1P49750 1951 aaKnown RBP0.7□□□□□ -2.3
NUP98-218ENST00000530516 PLEKHG2Q9H7P9 1386 aa0.7□□□□□ -2.3
NUP98-218ENST00000530516 OTOFQ9HC10 1997 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 RP1L1Q8IWN7 2480 aaPredicted RBP0.69□□□□□ -2.3
NUP98-218ENST00000530516 TRAV8-4A0A0B4J246 113 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 A0A1W2PRD5 423 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 C9JQL5 133 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 SIVA1O15304 175 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 ERLIN1O75477 346 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 S1PR2O95136 353 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 SNX4O95219 450 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 PTTG1O95997 202 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 P01737 135 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 CDK1P06493 297 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 SNRPAP09012 282 aaKnown RBP0.69□□□□□ -2.3
NUP98-218ENST00000530516 SLC18A1P54219 525 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 FAM231DQ6ZW35 169 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 DNAAF3Q8N9W5 541 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 OR10Z1Q8NGY1 313 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 OR8B2Q96RD0 313 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 BPIFA3Q9BQP9 254 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 DEFB129Q9H1M3 183 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 CLSTN2Q9H4D0 955 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 TUBA4BQ9H853 241 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 LYRM4Q9HD34 91 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 PRSS16Q9NQE7 514 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 CACNA1SQ13698 1873 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 GBF1Q92538 1859 aa0.69□□□□□ -2.3
NUP98-218ENST00000530516 LAMB2P55268 1798 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 LCTP09848 1927 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 A0A075B6Q4 140 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 CCDC169A6NNP5 214 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 GZMAP12544 262 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 CTLA4P16410 223 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 GPR1P46091 355 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 KRTAP10-4P60372 401 aaPredicted RBP0.68□□□□□ -2.3
NUP98-218ENST00000530516 RAB11AP62491 216 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 PAFAH1B2P68402 229 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 PSG4Q00888 419 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 RAD51Q06609 339 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 PMVKQ15126 192 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 RCN1Q15293 331 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 TMEM25Q86YD3 366 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 OFCC1Q8IZS5 231 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 OR4K2Q8NGD2 314 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 OR8A1Q8NGG7 326 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 LMX1AQ8TE12 382 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 CA5BP1Q8WTZ4 195 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 TMEM234Q8WY98 164 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 DOCK10Q96BY6 2186 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 MRPL20Q9BYC9 149 aaKnown RBP0.68□□□□□ -2.3
NUP98-218ENST00000530516 GABARAPL1Q9H0R8 117 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 ASB7Q9H672 318 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 KIR3DX1Q9H7L2 352 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 NMRK1Q9NWW6 199 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 OR5V1Q9UGF6 321 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 TAC3Q9UHF0 121 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 TBC1D24Q9ULP9 559 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 DDX19BQ9UMR2 479 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 KLF12Q9Y4X4 402 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 FADS3Q9Y5Q0 445 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 ADAMTS7Q9UKP4 1686 aa0.68□□□□□ -2.3
NUP98-218ENST00000530516 SHANK3Q9BYB0 1731 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 ZNF638Q14966 1978 aaKnown RBP0.67□□□□□ -2.3
NUP98-218ENST00000530516 SLC22A20A6NK97 555 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 F5H5P2 479 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 K7ERS5 55 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 DHRS3O75911 302 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 OR2A4O95047 310 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 HOXB8P17481 243 aaPredicted RBP0.67□□□□□ -2.3
NUP98-218ENST00000530516 CLDN18P56856 261 aa0.67□□□□□ -2.3
NUP98-218ENST00000530516 YWHAEP62258 255 aaKnown RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms