RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 HAUS1Q96CS2 278 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 YIPF6Q96EC8 236 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 PDXPQ96GD0 296 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF488Q96MN9 340 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 MBOAT7Q96N66 472 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 FOPNLQ96NB1 174 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 CAMK2N2Q96S95 79 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 C20orf144Q9BQM9 153 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 NDFIP1Q9BT67 221 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 NXF2Q9GZY0 626 aaKnown RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 VCXQ9H320 206 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 VCX3BQ9H321 246 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF442Q9H7R0 627 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 TMEM27Q9HBJ8 222 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 MYOZ1Q9NP98 299 aaPredicted RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 FBXO8Q9NRD0 319 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF355PQ9NSJ1 428 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 ZNRD1Q9P1U0 126 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 WIF1Q9Y5W5 379 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 DYSFO75923 2080 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 IGSF9BQ9UPX0 1349 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 KIR2DS1A0A191URI9 304 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 C9J4A7 227 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 LINC01619G3V211 115 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 J3QLI3 93 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 TNFRSF11BO00300 401 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 GPR171O14626 319 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SOCS1O15524 211 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 FABP7O15540 132 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 ATP8B1O43520 1251 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF207O43670 478 aaKnown RBP2.78□□□□□ -1.96
C11orf88-204ENST00000529661 HPGDSO60760 199 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 MED6O75586 246 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 OR5F1O95221 314 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 PTTG1O95997 202 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 PTHP01270 115 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 CTXN2P0C2S0 81 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SLC35G6P0C7Q6 338 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 COX5BP10606 129 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 MLNP12872 115 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 DTYMKP23919 212 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 HTR1DP28221 377 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 AQP5P55064 265 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 GFERP55789 205 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 TAS2R31P59538 309 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 ACTBP60709 375 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 RHOAP61586 193 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 ACTG1P63261 375 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SYCNQ0VAF6 134 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 TRAM1Q15629 374 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SYT6Q5T7P8 510 aaPredicted RBP2.78□□□□□ -1.96
C11orf88-204ENST00000529661 FAM45BPQ6NSW5 357 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 WDR86Q86TI4 376 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 ATPAF2Q8N5M1 289 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 OR8G5Q8NG78 346 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 OR51Q1Q8NH59 317 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 UBALD1Q8TB05 177 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 OTUB2Q96DC9 234 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 FAM19A4Q96LR4 140 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 TEAD3Q99594 435 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SULT4A1Q9BR01 284 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 C9orf16Q9BUW7 83 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 API5Q9BZZ5 524 aaKnown RBP2.78□□□□□ -1.96
C11orf88-204ENST00000529661 COA1Q9GZY4 146 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 ARV1Q9H2C2 271 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 RDH14Q9HBH5 336 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SPANXB1Q9NS25 103 aaPredicted RBP2.78□□□□□ -1.96
C11orf88-204ENST00000529661 PSG11Q9UQ72 335 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 SIGLEC9Q9Y336 463 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 UBIAD1Q9Y5Z9 338 aa2.78□□□□□ -1.96
C11orf88-204ENST00000529661 PTPRTO14522 1441 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 TNS2Q63HR2 1409 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RAB3GAP2Q9H2M9 1393 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 SIGLEC1Q9BZZ2 1709 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 FAM240AA0A1B0GVK7 77 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 BPY2O14599 106 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 MPZL2O60487 215 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 UGT2B11O75310 529 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 REM1O75628 298 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 CTDNEP1O95476 244 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 HSPD1P10809 573 aaKnown RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 POLR2IP36954 125 aaKnown RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 NKX2-5P52952 324 aaPredicted RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RAB38P57729 211 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 B2MP61769 119 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RPL23P62829 140 aaKnown RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 MGAT3Q09327 533 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 OR1Q1Q15612 314 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 TRIP13Q15645 432 aaPredicted RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 Q5W150 140 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 THOC7Q6I9Y2 204 aaKnown RBP2.77□□□□□ -1.97
C11orf88-204ENST00000529661 SLC16A13Q7RTY0 426 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 SLC30A8Q8IWU4 369 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 RIMKLAQ8IXN7 391 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 Q8N402 240 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 GPR26Q8NDV2 337 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 CCDC112Q8NEF3 446 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 OR4K17Q8NGC6 315 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 OR6N1Q8NGY5 312 aa2.77□□□□□ -1.97
C11orf88-204ENST00000529661 FAM45AQ8TCE6 357 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms