RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 TGFBR3Q03167 851 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 SLC25A47Q6Q0C1 308 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 ZNF704Q6ZNC4 412 aaPredicted RBP12.67□□□□□ -0.38
NR1H3-231ENST00000529540 BEND4Q6ZU67 534 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 PGAP1Q75T13 922 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 FJX1Q86VR8 437 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 LDLRAD3Q86YD5 345 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 OR13C3Q8NGS6 347 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 PPP1R14AQ96A00 147 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 FAM46BQ96A09 425 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 NARS2Q96I59 477 aaKnown RBP12.67□□□□□ -0.38
NR1H3-231ENST00000529540 MBD2Q9UBB5 411 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 GTF2A1LQ9UNN4 478 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 TMEM235A6NFC5 223 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 TNFSF13O75888 250 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 DUS4LO95620 317 aaKnown RBP12.67□□□□□ -0.38
NR1H3-231ENST00000529540 NTF4P34130 210 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 ADAM8P78325 824 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 HAGHLQ6PII5 290 aaPredicted RBP12.67□□□□□ -0.38
NR1H3-231ENST00000529540 Q6ZT83 130 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
NR1H3-231ENST00000529540 TRAPPC6BQ86SZ2 158 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 OR51A2Q8NGJ7 313 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 SEC22AQ96IW7 307 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
NR1H3-231ENST00000529540 NMES1Q9C002 83 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 C12orf49Q9H741 205 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 CRLF2Q9HC73 371 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 G6PC2Q9NQR9 355 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 FBLN5Q9UBX5 448 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
NR1H3-231ENST00000529540 SVILO95425 2214 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 LOC107986453A0A1B0GWG9 222 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 PQLC2LA1A4F0 135 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 WIPF3A6NGB9 483 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 RAB27BO00194 218 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 GPR31O00270 319 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 MSTNO14793 375 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 LAP3P28838 519 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 HSD11B1P28845 292 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 CX3CR1P49238 355 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 B2MP61769 119 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 FMODQ06828 376 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 CDNFQ49AH0 187 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 TMEM244Q5VVB8 128 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 IL34Q6ZMJ4 242 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 JAGN1Q8N5M9 183 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 OR10H5Q8NGA6 315 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 BBC3Q96PG8 261 aaPredicted RBP12.66□□□□□ -0.38
NR1H3-231ENST00000529540 RBM24Q9BX46 236 aaKnown RBP12.66□□□□□ -0.38
NR1H3-231ENST00000529540 NELFAQ9H3P2 528 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 GPR35Q9HC97 309 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 SLC7A10Q9NS82 523 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 OR52A1Q9UKL2 312 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 ANAPC10Q9UM13 185 aa12.66□□□□□ -0.38
NR1H3-231ENST00000529540 A0A0B4J2A0 478 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 CCL21O00585 134 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 FARS2O95363 451 aaKnown RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 BPNT1O95861 308 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 LYL1P12980 280 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 ZNF823P16415 610 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 PSMB6P28072 239 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 IL13RA1P78552 427 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 S100A12P80511 92 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 QRFPP83859 136 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 CYCSP99999 105 aaKnown RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 P2RY6Q15077 328 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 PCK2Q16822 640 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 BEX5Q5H9J7 111 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 DRAM2Q6UX65 266 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 FOXL2NBQ6ZUU3 175 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 MRGPRGQ86SM5 289 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 SPAG16Q8N0X2 631 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 PAQR4Q8N4S7 273 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 OR4S1Q8NGB4 309 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 STARD4Q96DR4 205 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 NKX3-1Q99801 234 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 MLXQ9UH92 298 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 SHPKQ9UHJ6 478 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-231ENST00000529540 ATRXP46100 2492 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.38
NR1H3-231ENST00000529540 SHANK1Q9Y566 2161 aa12.65□□□□□ -0.39
NR1H3-231ENST00000529540 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 MSR1P21757 451 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 SLC6A9P48067 706 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 LSM6P62312 80 aaKnown RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 FOXF2Q12947 444 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms