RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CALB1P05937 261 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SDC1P18827 310 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 FUT3P21217 361 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 CCNE1P24864 410 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 CD79BP40259 229 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 KIR2DS4P43632 304 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SERPINB8P50452 374 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 NDUFA8P51970 172 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 CCL23P55773 120 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 OR4D2P58180 307 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 RHOAP61586 193 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 CD164Q04900 197 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 LAMTOR4Q0VGL1 99 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 PTGES3Q15185 160 aaKnown RBP4.3□□□□□ -1.72
PCF11-202ENST00000528336 GUSBP1Q15486 140 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 ZIC1Q15915 447 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SPIN3Q5JUX0 258 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 CCNJQ5T5M9 372 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 MBOAT2Q6ZWT7 520 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 LYG2Q86SG7 212 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SLC51BQ86UW2 128 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 NT5DC3Q86UY8 548 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 PUSL1Q8N0Z8 303 aaKnown RBP4.3□□□□□ -1.72
PCF11-202ENST00000528336 MTURNQ8N3F0 131 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 ACBD4Q8NC06 268 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 OR1M1Q8NGA1 313 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 CREB3L1Q96BA8 519 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 TLCD1Q96CP7 247 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 TMEM80Q96HE8 168 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 ZNF488Q96MN9 340 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SDHCQ99643 169 aaPredicted RBP4.3□□□□□ -1.72
PCF11-202ENST00000528336 KCTD14Q9BQ13 255 aaPredicted RBP4.3□□□□□ -1.72
PCF11-202ENST00000528336 DSN1Q9H410 356 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 ASB7Q9H672 318 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SIAEQ9HAT2 523 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 BATF3Q9NR55 127 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SLC2A9Q9NRM0 540 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SMPXQ9UHP9 88 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 BTNL2Q9UIR0 455 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 ING4Q9UNL4 249 aa4.3□□□□□ -1.72
PCF11-202ENST00000528336 SAMD4AQ9UPU9 718 aaKnown RBP4.3□□□□□ -1.72
PCF11-202ENST00000528336 TNRC18O15417 2968 aaPredicted RBP4.3□□□□□ -1.72
PCF11-202ENST00000528336 MYH9P35579 1960 aaKnown RBP4.29□□□□□ -1.72
PCF11-202ENST00000528336 ALPK3Q96L96 1907 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 H7C2Y5 167 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 K7EMT4 169 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 DFFAO00273 331 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 ZNF593O00488 134 aaPredicted RBP4.29□□□□□ -1.72
PCF11-202ENST00000528336 CXCR6O00574 342 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 BIRC5O15392 142 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CRXO43186 299 aaPredicted RBP4.29□□□□□ -1.72
PCF11-202ENST00000528336 UGT1A9O60656 530 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 SERPINA1P01009 418 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CD8AP01732 235 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 HOXC4P09017 264 aaPredicted RBP4.29□□□□□ -1.72
PCF11-202ENST00000528336 WNT2P09544 360 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 LIPCP11150 499 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 IDO1P14902 403 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CELP19835 753 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TBPP20226 339 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 LIM2P55344 173 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CLDN12P56749 244 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TAS2R31P59538 309 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 ST3GAL4Q11206 333 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TAF1AQ15573 450 aaPredicted RBP4.29□□□□□ -1.72
PCF11-202ENST00000528336 TBC1D28Q2M2D7 210 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 GPRC6AQ5T6X5 926 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 MEDAGQ5VYS4 303 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 LRRN1Q6UXK5 716 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CASP12Q6UXS9 341 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 LHFPL3Q86UP9 236 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CBLN2Q8IUK8 224 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 DAW1Q8N136 415 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 PXT1Q8NFP0 134 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 PIFOQ8TCI5 191 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 DOK4Q8TEW6 326 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TRUB1Q8WWH5 349 aaKnown RBP4.29□□□□□ -1.72
PCF11-202ENST00000528336 PAGE5Q96GU1 130 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 Q96MT0 163 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 MCHR1Q99705 422 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 CHIAQ9BZP6 476 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 ARL6Q9H0F7 186 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TLNRD1Q9H1K6 362 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 PRO3102Q9H379 93 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 ACOT13Q9NPJ3 140 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TIGARQ9NQ88 270 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 DIABLOQ9NR28 239 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 TMEM9Q9P0T7 183 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 PSG11Q9UQ72 335 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 GINS2Q9Y248 185 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 ARL5AQ9Y689 179 aa4.29□□□□□ -1.72
PCF11-202ENST00000528336 LOC100131303A0A0U1RQF7 123 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 PVALEFA0A1B0GWK0 134 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 A6NDN8 102 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 B4DXG7 233 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 LOC110117498-PIK3R3F6TDL0 507 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SMKR1H3BMG3 65 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SULT2B1O00204 365 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms