RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 HMGN2P05204 90 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 IL6P05231 212 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 KRT16P08779 473 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 NPIPA8P0DM63 369 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PPIAL4GP0DN37 164 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CPN1P15169 458 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CNR1P21554 472 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 GALP22466 123 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 UQCRC2P22695 453 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 GABRA3P34903 492 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 HTR2BP41595 481 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CCT3P49368 545 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 GDI2P50395 445 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 POLR2JP52435 117 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 TSPAN5P62079 268 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 KCNJ2P63252 427 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 MRPS22P82650 360 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 PLGLB1Q02325 96 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ZNHIT3Q15649 155 aaPredicted RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 RGS21Q2M5E4 152 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 TMEM41BQ5BJD5 291 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PAGE3Q5JUK9 113 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CCNJQ5T5M9 372 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 SAXO2Q658L1 398 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 TNFAIP8L2Q6P589 184 aaPredicted RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 OLIG3Q7RTU3 272 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 C6orf120Q7Z4R8 191 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 AKAP14Q86UN6 197 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ZNF573Q86YE8 665 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CDH26Q8IXH8 852 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 MSRB3Q8IXL7 192 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 TMEM251Q8N6I4 163 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 COX18Q8N8Q8 333 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 LINC01006Q8NI28 216 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 FAM110BQ8TC76 370 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PNPT1Q8TCS8 783 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 GPR151Q8TDV0 419 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ZFP90Q8TF47 636 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 NEURL3Q96EH8 262 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CHMP6Q96FZ7 201 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 AURKBQ96GD4 344 aaPredicted RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 JSRP1Q96MG2 331 aaPredicted RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 COL21A1Q96P44 957 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 OR7D2Q96RA2 312 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 OR52E6Q96RD3 313 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PANX1Q96RD7 426 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ANGPTL4Q9BY76 406 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 OR51I1Q9H343 314 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PIGUQ9H490 435 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 METTL7AQ9H8H3 244 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 COQ10BQ9H8M1 238 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ZDHHC11Q9H8X9 412 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 NTN4Q9HB63 628 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PAQR5Q9NXK6 330 aaPredicted RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 GIN1Q9NXP7 522 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 SLC25A37Q9NYZ2 338 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CCDC167Q9P0B6 97 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 SPRR3Q9UBC9 169 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 SEC14L3Q9UDX4 400 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 BOKQ9UMX3 212 aaPredicted RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 NPIPA1Q9UND3 350 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 WDR45Q9Y484 360 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 OR10H1Q9Y4A9 318 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 WIF1Q9Y5W5 379 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 KCNE3Q9Y6H6 103 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CEP295Q9C0D2 2601 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CFAP47Q6ZTR5 3102 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 SHANK1Q9Y566 2161 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 NCKAP5O14513 1909 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ZZEF1O43149 2961 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 LAMA5O15230 3695 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 LOC400499M0QZD8 3231 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 EML6Q6ZMW3 1958 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 A0A096LPI6 279 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 IGLV3-32A0A0A0MS00 114 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 A0A1W2PP18 115 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TUBAL3A6NHL2 446 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 FXYD1O00168 92 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 HMGN4O00479 90 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 RFXANKO14593 260 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 LANCL1O43813 399 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 FADS1O60427 444 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ATP5HO75947 161 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 UTS2O95399 124 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 KRT75O95678 551 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 OXSR1O95747 527 aaPredicted RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 OPN1LWP04000 364 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 HPNP05981 417 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 GLAP06280 429 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 PABPC4LP0CB38 370 aaKnown RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 DUX4L4P0CJ87 422 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 OR12D1P0DN82 309 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 POU2F1P14859 743 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ABOP16442 354 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 PRKACAP17612 351 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 NCF2P19878 526 aaPredicted RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 M6PRP20645 277 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 LCN1P31025 176 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 CHI3L1P36222 383 aaPredicted RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 RBMXP38159 391 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms