RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TRAPPC2LH3BP13 241 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 SIRPB1O00241 398 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 DVL1O14640 695 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 MAGEB3O15480 346 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 GPX5O75715 221 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 HTR3BO95264 441 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TNFAIP8O95379 198 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 AVPP01185 164 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 MSMBP08118 114 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CLEC2LP0C7M8 214 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PGA5P0DJD9 388 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 SMIM18P0DKX4 95 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PSG2P11465 335 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CPEP16870 476 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PRKACBP22694 351 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 GADD45AP24522 165 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CALRP27797 417 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 BDKRB2P30411 391 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF93P35789 620 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 MDH2P40926 338 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PITPNBP48739 271 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CAPZA1P52907 286 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CAV3P56539 151 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CLDN12P56749 244 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR10A3P58181 314 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ERVFRD-1P60508 538 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ZP1P60852 638 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 LSM3P62310 102 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 GNB2P62879 340 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PPP3R1P63098 170 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 BDH1Q02338 343 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 COL10A1Q03692 680 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 MZT1Q08AG7 82 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ACSM1Q08AH1 577 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 IL24Q13007 206 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PLA2G7Q13093 441 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PDZK1IP1Q13113 114 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 P2RY14Q15391 338 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 DGUOKQ16854 277 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 MICBQ29980 383 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF181Q2M3W8 571 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PIGYQ3MUY2 71 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 HSD17B12Q53GQ0 312 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM76BQ5HYJ3 339 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 UBE2UQ5VVX9 321 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 RNLSQ5VYX0 342 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 STUMQ69YW2 141 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CYB5R2Q6BCY4 276 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR10K2Q6IF99 312 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 BRICD5Q6PL45 260 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 UNQ9370/PRO34162Q6UXP9 181 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ACP7Q6ZNF0 438 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 LHFPL2Q6ZUX7 228 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 UTS2BQ765I0 119 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 KRT74Q7RTS7 529 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 LRRTM1Q86UE6 522 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 RTN4RL2Q86UN3 420 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF573Q86YE8 665 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 PDZD9Q8IXQ8 264 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 MKXQ8IYA7 352 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TPRX1Q8N7U7 411 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CCDC54Q8NEL0 328 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM185AQ8NFB2 350 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR8B3Q8NGG8 313 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR4D6Q8NGJ1 314 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR51F2Q8NH61 342 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF671Q8TAW3 534 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ERGIC1Q969X5 290 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 SPSB1Q96BD6 273 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 NEIL1Q96FI4 390 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CEP19Q96LK0 163 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR8B2Q96RD0 313 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 GFI1Q99684 422 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CHCHD6Q9BRQ6 235 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 YTHDF1Q9BYJ9 559 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CHST6Q9GZX3 395 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 BANF2Q9H503 90 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 CNTD2Q9H8S5 307 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TCF7L1Q9HCS4 588 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ABCB9Q9NP78 766 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 ISYNA1Q9NPH2 558 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM138Q9NPI0 162 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 HIF1ANQ9NWT6 349 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 NLKQ9UBE8 527 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 SOX21Q9Y651 276 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 HEATR1Q9H583 2144 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 RTTNQ86VV8 2226 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TEX15Q9BXT5 2789 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 LOC105371242A0A075B767 164 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A087WXM4 84 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAV39A0A0B4J263 110 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A1W2PRD5 423 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A1W2PRF3 423 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A1W2PRM7 423 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM82A0PJX8 343 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NKX6-3A6NJ46 265 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 B4DSR2 109 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms