RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 FAM24AA6NFZ4 105 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 IFNA21P01568 189 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 CXCL1P09341 107 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 DANCRP0C864 163 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
CAPN1-202ENST00000524773 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 WDSUB1Q8N9V3 476 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 ZNF383Q8NA42 475 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 S100A13Q99584 98 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 PIGQQ9BRB3 760 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 PNRC2Q9NPJ4 139 aaKnown RBP11.51□□□□□ -0.57
CAPN1-202ENST00000524773 TRIOBPQ9H2D6 2365 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 A0A1W2PQD3 144 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 CXorf65A6NEN9 183 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 VSTM2BA6NLU5 285 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 CEACAM18A8MTB9 384 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 TAAR5O14804 337 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 S100PP25815 95 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 CFHR1Q03591 330 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 ZNF674Q2M3X9 581 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 PRAMEF20Q5VT98 475 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 TMEM217Q8N7C4 229 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 OR14K1Q8NGZ2 314 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 MRPL13Q9BYD1 178 aaKnown RBP11.51□□□□□ -0.57
CAPN1-202ENST00000524773 ANAPC10Q9UM13 185 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 MUC3AQ02505 3323 aa11.51□□□□□ -0.57
CAPN1-202ENST00000524773 PRRC2CQ9Y520 2896 aaKnown RBP11.5□□□□□ -0.57
CAPN1-202ENST00000524773 TGIF2-C20orf24A0A0A6YYL0 155 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 FIGNL2A6NMB9 653 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 H3BMH7 237 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 TAS2R46P59540 309 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
CAPN1-202ENST00000524773 SLC35A1P78382 337 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 PHYHD1Q5SRE7 291 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-202ENST00000524773 TMEM234Q8WY98 164 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 ZNF837Q96EG3 531 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-202ENST00000524773 TOLLIPQ9H0E2 274 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 PRO1933Q9H354 126 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 NELFAQ9H3P2 528 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 CCDC187A0A096LP49 1063 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 G3V3Y1 287 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 PATE4P0C8F1 98 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 RUNX1Q01196 453 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 TMEM176BQ3YBM2 270 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-202ENST00000524773 OPN5Q6U736 354 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 OR10G3Q8NGC4 313 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 RTN4IP1Q8WWV3 396 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-202ENST00000524773 SCGB3A2Q96PL1 93 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 ZNF700Q9H0M5 742 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 ZNF160Q9HCG1 818 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 AK3Q9UIJ7 227 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 MTCH2Q9Y6C9 303 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 ASPMQ8IZT6 3477 aa11.5□□□□□ -0.57
CAPN1-202ENST00000524773 TLCD2A6NGC4 264 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 IGFBP4P22692 258 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 FAM3AP98173 230 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 PIGYQ3MUY2 71 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 RNF212Q495C1 297 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 ABCA11PQ4W5N1 156 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 KIAA0895LQ68EN5 471 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 UBAC2Q8NBM4 344 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 DDIT4LQ96D03 193 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 LUZP4Q9P127 313 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 LIPGQ9Y5X9 500 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 ADAMTS9Q9P2N4 1935 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 CRYM-AS1A6NIL9 109 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 SCGNO76038 276 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 CST7O76096 145 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 RGS19P49795 217 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 CLDN17P56750 224 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 SNAI3Q3KNW1 292 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 FAM180AQ6UWF9 173 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 SUMF2Q8NBJ7 301 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 SLC38A9Q8NBW4 561 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 NOXO1Q8NFA2 376 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 POC1BQ8TC44 478 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 HPSE2Q8WWQ2 592 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 SLC35B3Q9H1N7 401 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 HDGFL3Q9Y3E1 203 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 MMACHCQ9Y4U1 282 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 HS3ST3B1Q9Y662 390 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 URB1O60287 2271 aaKnown RBP11.49□□□□□ -0.57
CAPN1-202ENST00000524773 ZNF407Q9C0G0 2248 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-202ENST00000524773 IGHG1P01857 330 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 FOSL2P15408 326 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 CSNK1A1P48729 337 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 RAB2AP61019 212 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 HNF4GQ14541 408 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
CAPN1-202ENST00000524773 MYPOPQ86VE0 399 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms