RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CBLN2Q8IUK8 224 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 SPAG16Q8N0X2 631 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 FAM71E2Q8N5Q1 922 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 ESX1Q8N693 406 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 OR2Y1Q8NGV0 311 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 OR1F12Q8NHA8 337 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 MRPL24Q96A35 216 aaKnown RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CPNE2Q96FN4 548 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CMSS1Q9BQ75 279 aaKnown RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CRLF2Q9HC73 371 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 PRELID3BQ9Y3B1 194 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 FAM96BQ9Y3D0 163 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 NCKAP5O14513 1909 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 CCDC187A0A096LP49 1063 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 NSG1A0A0A6YYJ2 146 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 H7C2Y5 167 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 MED6O75586 246 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 CST4P01036 141 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 LCATP04180 440 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-228ENST00000524023 DTYMKP23919 212 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 CHATP28329 748 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 OPRM1P35372 400 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 RBP2P50120 134 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 SULT1A2P50226 295 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 PRSS12P56730 875 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 SMCO1Q147U7 214 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 DHRS11Q6UWP2 260 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 ASCL4Q6XD76 172 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 PRRX2Q99811 253 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 NRIP2Q9BQI9 281 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 SULT4A1Q9BR01 284 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 TMEM38BQ9NVV0 291 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 NECAP2Q9NVZ3 263 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 OR6C6A6NF89 314 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF850A8MQ14 1090 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
HDAC9-228ENST00000524023 GAPDHP04406 335 aaKnown RBP9.63□□□□□ -0.87
HDAC9-228ENST00000524023 FCGR3AP08637 254 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 PATE4P0C8F1 98 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF32P17041 273 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 NME2P22392 152 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 FCGR2CP31995 323 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 NPBWR1P48145 328 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 PIGPP57054 158 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 LHFPL2Q6ZUX7 228 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 YRDCQ86U90 279 aaKnown RBP9.63□□□□□ -0.87
HDAC9-228ENST00000524023 OR10Z1Q8NGY1 313 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 AKR7LQ8NHP1 331 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 CPT1CQ8TCG5 803 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 HLA-CQ95604 372 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 TOMM40LQ969M1 308 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 BORCS8Q96FH0 119 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 RCC2Q9P258 522 aaKnown RBP9.63□□□□□ -0.87
HDAC9-228ENST00000524023 FBXL17Q9UF56 701 aa9.63□□□□□ -0.87
HDAC9-228ENST00000524023 LSM5Q9Y4Y9 91 aaKnown RBP9.63□□□□□ -0.87
HDAC9-228ENST00000524023 A0A0G2JMM0 328 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 A0A1W2PPB8 328 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 A0A1W2PRS3 328 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF716A6NP11 495 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 KIR3DP1A8MWS1 328 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 NTN3O00634 580 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-228ENST00000524023 TNRC18O15417 2968 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-228ENST00000524023 JTBO76095 146 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF728P0DKX0 622 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 B4GALT1P15291 398 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 SRD5A2P31213 254 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 TMEM33P57088 247 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 CARD18P57730 90 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 TMEM187Q14656 261 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 KRTAP27-1Q3LI81 207 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 TMEM42Q69YG0 159 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 BTNL8Q6UX41 500 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 GGNQ86UU5 652 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 DYRK2Q92630 601 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 NAA60Q9H7X0 242 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 KCNIP3Q9Y2W7 256 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 AMDHD2Q9Y303 409 aa9.62□□□□□ -0.87
HDAC9-228ENST00000524023 IGKV1-12A0A0C4DH73 117 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 RNASEK-C17orf49H0YIS7 233 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 GEMIN2O14893 280 aaKnown RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 FBXO24O75426 580 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF205O95201 554 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 NRASP01111 189 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 IGKV1D-12P01611 117 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 CFIP05156 583 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 PVALBP20472 110 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 HTR5AP47898 357 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 ZFP36L1Q07352 338 aaKnown RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 TRA2AQ13595 282 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 PIGYQ3MUY2 71 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 SP6Q3SY56 376 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 OR10AD1Q8NGE0 317 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 OR14L1PQ8NHC6 308 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 GALNT14Q96FL9 552 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 MARS2Q96GW9 593 aaKnown RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 SGCZQ96LD1 299 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 ALKBH3Q96Q83 286 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 PARP11Q9NR21 331 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms