RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 HIST2H3PS2Q5TEC6 136 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 SLC35E4Q6ICL7 350 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 TMPRSS11FQ6ZWK6 438 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 HIST2H3AQ71DI3 136 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ADCK1Q86TW2 530 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 CYP4Z1Q86W10 505 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 RNF113BQ8IZP6 322 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 LYG1Q8N1E2 194 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 PARP16Q8N5Y8 322 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 OR4K13Q8NH42 304 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 OR52J3Q8NH60 311 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 LRRC29Q8WV35 223 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 H1FXQ92522 213 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 SGCDQ92629 289 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ZNF799Q96GE5 643 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ATP6V1G3Q96LB4 118 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ERMAPQ96PL5 475 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 NMNAT3Q96T66 252 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ATF6BQ99941 703 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 FN3KQ9H479 309 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 C16orf95Q9H693 158 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 RPRD1BQ9NQG5 326 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 KRT84Q9NSB2 600 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 GID8Q9NWU2 228 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ADA2Q9NZK5 511 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ATPIF1Q9UII2 106 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 RPUSD1Q9UJJ7 312 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 VPREB3Q9UKI3 123 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 B9D1Q9UPM9 204 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 FOXJ3Q9UPW0 622 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 SIGLEC7Q9Y286 467 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 TMEM5Q9Y2B1 443 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 CAB39Q9Y376 341 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 LSM4Q9Y4Z0 139 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 CAPN7Q9Y6W3 813 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 IGLV1-36A0A0B4J1U3 117 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 TRBV4-1A0A0J9YWV2 114 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 A0A1B0GVI7 797 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 C5orf63A6NC05 138 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 BBIP1A8MTZ0 92 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 ANKRD65E5RJM6 399 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 CXCR6O00574 342 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 BHLHE40O14503 412 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 NPFFO15130 113 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 NDUFB3O43676 98 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 NDUFA2O43678 99 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 GMDSO60547 372 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 PTP4A3O75365 173 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 FCN3O75636 299 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 TSPAN9O75954 239 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 DIRAS1O95057 198 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 ECDO95905 644 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 RENP00797 406 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OPN1MWP04001 364 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 TFF1P04155 84 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 H1F0P07305 194 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 HOXB5P09067 269 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OPN1MW2P0DN77 364 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OPN1MW3P0DN78 364 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC2A1P11166 492 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 NCK1P16333 377 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF823P16415 610 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 ANOS1P23352 680 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 PAX6P26367 422 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 ARL3P36405 182 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 TGFBR2P37173 567 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 RPS27P42677 84 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 PRKXP51817 358 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 GNGT1P63211 74 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 LIPEQ05469 1076 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 HERPUD1Q15011 391 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 TAF13Q15543 124 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 MAPRE2Q15555 327 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 PCK2Q16822 640 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 MICBQ29980 383 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 RFX4Q33E94 735 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 NSUN5P1Q3KNT7 163 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC36A3Q495N2 470 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 WDR38Q5JTN6 314 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 GLYATL3Q5SZD4 288 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SMARCD3Q6STE5 483 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 DPY19L2P2Q6ZN68 376 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 TSEN54Q7Z6J9 526 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 NOXA1Q86UR1 476 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OR6V1Q8N148 313 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 GCSAMQ8N6F7 178 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 FAM216BQ8N7L0 139 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SDR9C7Q8NEX9 313 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC26A10Q8NG04 563 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OR5T2Q8NGG2 359 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OR56B2PQ8NGI1 322 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 OR8S1Q8NH09 359 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 FANK1Q8TC84 345 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC7A13Q8TCU3 470 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 RORBQ92753 470 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SPTSSAQ969W0 71 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 FAM162AQ96A26 154 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 RCN3Q96D15 328 aa4.27□□□□□ -1.73
CTNNA1-239ENST00000523685 SEH1LQ96EE3 360 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms