RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CAB39Q9Y376 341 aaPredicted RBP17.06■□□□□ 0.32
TRIM35-203ENST00000521253 MAB21L2Q9Y586 359 aa17.06■□□□□ 0.32
TRIM35-203ENST00000521253 RFPL4AA6NLU0 287 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 RFPL4AL1F8VTS6 287 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 TOX4O94842 621 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 PLATP00750 562 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 ATF1P18846 271 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 MYL12AP19105 171 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 AZGP1P25311 298 aaKnown RBP17.05■□□□□ 0.32
TRIM35-203ENST00000521253 ERVK11-1P61568 191 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 ARF6P62330 175 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 TUSC1Q2TAM9 212 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 METTL11BQ5VVY1 283 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 XAF1Q6GPH4 301 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 TMPRSS11AQ6ZMR5 421 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 CD177Q8N6Q3 437 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 ZNRF1Q8ND25 227 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 DNAAF1Q8NEP3 725 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 OR5AK2Q8NH90 309 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 SPATA3Q8NHX4 192 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 FBLIM1Q8WUP2 373 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 GGHQ92820 318 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 TMEM80Q96HE8 168 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 WDFY2Q96P53 400 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 TBX15Q96SF7 602 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 DCTN5Q9BTE1 182 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 C19orf24Q9BVV8 132 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 COMMD4Q9H0A8 199 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 SIRPDQ9H106 197 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 CNTD2Q9H8S5 307 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 MTCH1Q9NZJ7 389 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 CLEC2DQ9UHP7 191 aa17.05■□□□□ 0.32
TRIM35-203ENST00000521253 EXOSC1Q9Y3B2 195 aaKnown RBP17.05■□□□□ 0.32
TRIM35-203ENST00000521253 TRBV2A0A0J9YWF9 115 aa17.04■□□□□ 0.32
TRIM35-203ENST00000521253 NDUFB7P17568 137 aa17.04■□□□□ 0.32
TRIM35-203ENST00000521253 RBP2P50120 134 aa17.04■□□□□ 0.32
TRIM35-203ENST00000521253 CAV3P56539 151 aa17.04■□□□□ 0.32
TRIM35-203ENST00000521253 SLC25A26Q70HW3 274 aa17.04■□□□□ 0.32
TRIM35-203ENST00000521253 H1FXQ92522 213 aaKnown RBP17.04■□□□□ 0.32
TRIM35-203ENST00000521253 SLAMF9Q96A28 289 aa17.04■□□□□ 0.32
TRIM35-203ENST00000521253 MS4A7Q9GZW8 240 aaPredicted RBP17.04■□□□□ 0.32
TRIM35-203ENST00000521253 SOX21Q9Y651 276 aaPredicted RBP17.04■□□□□ 0.32
TRIM35-203ENST00000521253 F8VVB4 439 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 F8VWA3 439 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 XPNPEP2O43895 674 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 INMTO95050 263 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 RPSAP08865 295 aaKnown RBP17.03■□□□□ 0.32
TRIM35-203ENST00000521253 PRKACBP22694 351 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 PRDX2P32119 198 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 CEBPDP49716 269 aaPredicted RBP17.03■□□□□ 0.32
TRIM35-203ENST00000521253 ATP1B3P54709 279 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 MTCP1P56278 107 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 ST3GAL4Q11206 333 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 CCDC58Q4VC31 144 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 RPL22L1Q6P5R6 122 aaKnown RBP17.03■□□□□ 0.32
TRIM35-203ENST00000521253 C9orf139Q6ZV77 190 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 SIGLECL1Q8N7X8 197 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 TMEM185AQ8NFB2 350 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 OR13C9Q8NGT0 318 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 C8orf46Q8TAG6 207 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 SPSB1Q96BD6 273 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 CEP19Q96LK0 163 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 OPALINQ96PE5 141 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 JMJD8Q96S16 334 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 ELL3Q9HB65 397 aaPredicted RBP17.03■□□□□ 0.32
TRIM35-203ENST00000521253 ESM1Q9NQ30 184 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 ONECUT1Q9UBC0 465 aa17.03■□□□□ 0.32
TRIM35-203ENST00000521253 EFCAB10A6NFE3 127 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 PIPP12273 146 aaPredicted RBP17.02■□□□□ 0.32
TRIM35-203ENST00000521253 AQP4P55087 323 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 CDK5R1Q15078 307 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 GPR157Q5UAW9 335 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 BRD3OSQ6XYD6 125 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 LHFPL2Q6ZUX7 228 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 TSEN15Q8WW01 171 aaKnown RBP17.02■□□□□ 0.32
TRIM35-203ENST00000521253 RGP1Q92546 391 aaPredicted RBP17.02■□□□□ 0.32
TRIM35-203ENST00000521253 ZNF48Q96MX3 618 aaPredicted RBP17.02■□□□□ 0.32
TRIM35-203ENST00000521253 ZCCHC4Q9H5U6 513 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 BABAM2Q9NXR7 383 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 CNOT2Q9NZN8 540 aaKnown RBP17.02■□□□□ 0.32
TRIM35-203ENST00000521253 OR14J1Q9UGF5 321 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 PSORS1C1Q9UIG5 152 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 DHDHQ9UQ10 334 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 KPTNQ9Y664 436 aa17.02■□□□□ 0.32
TRIM35-203ENST00000521253 SIRT4Q9Y6E7 314 aaPredicted RBP17.02■□□□□ 0.32
TRIM35-203ENST00000521253 SLC1A7O00341 560 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 LALBAP00709 142 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 KNG1P01042 644 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 MT-ND2P03891 347 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 OCM2P0CE71 109 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 OCMP0CE72 109 aaPredicted RBP17.01■□□□□ 0.31
TRIM35-203ENST00000521253 POU3F4P49335 361 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 CAPZA1P52907 286 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 RBMS3Q6XE24 437 aaKnown RBP17.01■□□□□ 0.31
TRIM35-203ENST00000521253 RNF144BQ7Z419 303 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 ZNF561Q8N587 486 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 PARP16Q8N5Y8 322 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 ZDHHC22Q8N966 263 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 BPIFB6Q8NFQ5 453 aa17.01■□□□□ 0.31
TRIM35-203ENST00000521253 OR52N1Q8NH53 320 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms