RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ATP1B2P14415 290 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SDC1P18827 310 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CNR1P21554 472 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CCR7P32248 378 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ATP6V1E1P36543 226 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 OPRD1P41143 372 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 XCR1P46094 333 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SPINT3P49223 89 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RBP2P50120 134 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC25A1P53007 311 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CAV3P56539 151 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 H2BFSP57053 126 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PFN3P60673 137 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RHOAP61586 193 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 NUTF2P61970 127 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 LSM6P62312 80 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAP1AP62834 184 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPS25P62851 125 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPL38P63173 70 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SELENOWP63302 87 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 MRPS11P82912 194 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 HMGCS1Q01581 520 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 BCL2L1Q07817 233 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 GAMTQ14353 236 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PTGES3Q15185 160 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RGNQ15493 299 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 MPPED2Q15777 294 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZIC1Q15915 447 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 C18orf21Q32NC0 220 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF658BQ4V348 819 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRR30Q53SZ7 412 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 THEM4Q5T1C6 240 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 AADACL4Q5VUY2 407 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 LIPKQ5VXJ0 399 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRIQKQ629K1 86 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 C22orf42Q6IC83 251 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SCIMPQ6UWF3 145 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ALKAL2Q6UX46 152 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMIGD1Q6UXZ0 262 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 MBOAT1Q6ZNC8 495 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TPGS1Q6ZTW0 290 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC36A1Q7Z2H8 476 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TPRA1Q86W33 373 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 AMZ2Q86W34 360 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRIM69Q86WT6 500 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 LRRC28Q86X40 367 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC30A8Q8IWU4 369 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SVBPQ8N300 66 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 KRTCAP2Q8N6L1 136 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 C19orf18Q8NEA5 215 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PXT1Q8NFP0 134 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR4F15Q8NGB8 312 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR2AP1Q8NGE2 309 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR52E1Q8NGJ3 308 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 THEM6Q8WUY1 208 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ASZ1Q8WWH4 475 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ASB13Q8WXK3 278 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ACOT12Q8WYK0 555 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 AP3S1Q92572 193 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 HIST1H2BAQ96A08 127 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PHYHIPLQ96FC7 376 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SMIM14Q96QK8 99 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 COPS8Q99627 209 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 NIPSNAP1Q9BPW8 284 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 DOHHQ9BU89 302 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PAXXQ9BUH6 204 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 APOOQ9BUR5 198 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF426Q9BUY5 554 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SEC11CQ9BY50 192 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CHST5Q9GZS9 411 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SIRPDQ9H106 197 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 METTL9Q9H1A3 318 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ABCG5Q9H222 651 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 NCOR1P1Q9H4R4 102 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM38AQ9H6F2 299 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 METTL17Q9H7H0 456 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 C14orf105Q9NVL8 296 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TAS2R5Q9NYW4 299 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 MED11Q9P086 117 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 DPM3Q9P2X0 92 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 VPS29Q9UBQ0 182 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPS6KB2Q9UBS0 482 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRODH2Q9UF12 536 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CLEC4AQ9UMR7 237 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRG3Q9Y2Y8 225 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CBY1Q9Y3M2 126 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 POLR3HQ9Y535 204 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TICRRQ7Z2Z1 1910 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 THSD7BQ9C0I4 1608 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 VWA8A3KMH1 1905 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 PLXND1Q9Y4D7 1925 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 A0A087WUJ7 227 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRBV6-7A0A0A0MS04 114 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRAV14DV4A0A0A6YYC5 116 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 A0A1B0GTI1 187 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC5A10A0PJK1 596 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR6C74A6NCV1 312 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RFPL4AA6NLU0 287 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 1058 ms