RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 PYDC1Q8WXC3 89 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 TNFRSF14Q92956 283 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 EME1Q96AY2 570 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 NRIP2Q9BQI9 281 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 PKIBQ9C010 78 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 FAM234AQ9H0X4 552 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 GNG8Q9UK08 70 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
TCOF1-215ENST00000515516 SNTNA6NMZ2 147 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 H3BSH0 61 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 UBCP0CG48 685 aaKnown RBP11.18□□□□□ -0.62
TCOF1-215ENST00000515516 MPZP25189 248 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 TGFBR2P37173 567 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 FUT6P51993 359 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 IL24Q13007 206 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 TAF9Q16594 264 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 MIDNQ504T8 468 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 Q6ZSR3 168 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 OR4M1Q8NGD0 313 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 RORBQ92753 470 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 C10orf35Q96D05 121 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 C19orf12Q9NSK7 152 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 USE1Q9NZ43 259 aa11.18□□□□□ -0.62
TCOF1-215ENST00000515516 DOCK11Q5JSL3 2073 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 M0QZ24 198 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 TIMM23O14925 209 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CYB5AP00167 134 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 TK1P04183 234 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CHRM2P08172 466 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 OCM2P0CE71 109 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 OCMP0CE72 109 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CEBPDP49716 269 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 LGALS4P56470 323 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 ACTC1P68032 377 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 ACTA1P68133 377 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CNN3Q15417 329 aaKnown RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 TMEM200BQ69YZ2 307 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CCDC121Q6ZUS5 278 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 KCTD20Q7Z5Y7 419 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CALHM1Q8IU99 346 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 MKXQ8IYA7 352 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 ASCC1Q8N9N2 400 aaKnown RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 ZSCAN4Q8NAM6 433 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 BEND2Q8NDZ0 799 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 LINC01006Q8NI28 216 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 BORCS8Q96FH0 119 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 MRPL48Q96GC5 212 aaKnown RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 CEP19Q96LK0 163 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 MYCBPQ99417 103 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-215ENST00000515516 HES4Q9HCC6 221 aa11.17□□□□□ -0.62
TCOF1-215ENST00000515516 DAPL1A0PJW8 107 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 ZNF20P17024 532 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 ATP1B3P54709 279 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 ERVFRD-1P60508 538 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 COL10A1Q03692 680 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
TCOF1-215ENST00000515516 UBE2V2Q15819 145 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 TP53I3Q53FA7 332 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 MEDAGQ5VYS4 303 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 PP6455Q8WZ26 134 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 RNFT2Q96EX2 444 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 SSX3Q99909 188 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 CITED1Q99966 193 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 CHST5Q9GZS9 411 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 PPA2Q9H2U2 334 aa11.16□□□□□ -0.62
TCOF1-215ENST00000515516 LOC107986453A0A1B0GWG9 222 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 H3BUX3 64 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 K7N7A8 449 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 EI24O14681 340 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ENTPD6O75354 484 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 CLPXO76031 633 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 INMTO95050 263 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ALPLP05186 524 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 PIPP12273 146 aaPredicted RBP11.15□□□□□ -0.62
TCOF1-215ENST00000515516 COX7A1P24310 79 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 RBP2P50120 134 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ALDH3A2P51648 485 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 EDDM3BP56851 147 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ERVK11-1P61568 191 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ZNF85Q03923 595 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 KPNB1Q14974 876 aaKnown RBP11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ZIK1Q3SY52 487 aaPredicted RBP11.15□□□□□ -0.62
TCOF1-215ENST00000515516 Q6ZSV7 163 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 SLC25A26Q70HW3 274 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 GDPD3Q7L5L3 318 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 Q8IYB0 196 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 ENTHD1Q8IYW4 607 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 RDH10Q8IZV5 341 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 PRSS35Q8N3Z0 413 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 UBE2FQ969M7 185 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 SLAMF9Q96A28 289 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 HRASLS5Q96KN8 279 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 C16orf95Q9H693 158 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 TCF7L1Q9HCS4 588 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 RAB18Q9NP72 206 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms