RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF676Q8N7Q3 588 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 ZFAND2BQ8WV99 257 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 Q96MT0 163 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 NRIP2Q9BQI9 281 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 C19orf12Q9NSK7 152 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 ERVK13-1Q9NX77 482 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 MTCH1Q9NZJ7 389 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 IL36RNQ9UBH0 155 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 A0A0U1RQK1 487 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 TMEM89A2RUT3 159 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 SNTNA6NMZ2 147 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 OR4C45A6NMZ5 311 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 SPRY1O43609 319 aaPredicted RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 FADS2O95864 444 aaKnown RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 SERPINA3P01011 423 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 UBCP0CG48 685 aaKnown RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 PIPP12273 146 aaPredicted RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 ZNF20P17024 532 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 PAX6P26367 422 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 NPBWR2P48146 333 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 ETV1P50549 477 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 FUT6P51993 359 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 ALKBH1Q13686 389 aaKnown RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 SMIM21Q3B7S5 101 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 TMEM244Q5VVB8 128 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 C9orf139Q6ZV77 190 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 KCTD20Q7Z5Y7 419 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 OR13C3Q8NGS6 347 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 GATAD2BQ8WXI9 593 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 BORCS8Q96FH0 119 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 SDSLQ96GA7 329 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 NKX3-1Q99801 234 aaPredicted RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 PDCD1LG2Q9BQ51 273 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 CHST5Q9GZS9 411 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 DNTTIP1Q9H147 329 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 RASL12Q9NYN1 266 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 RPL36Q9Y3U8 105 aaKnown RBP9.44□□□□□ -0.9
VCAN-212ENST00000515397 PCDHGB1Q9Y5G3 927 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 KPTNQ9Y664 436 aa9.44□□□□□ -0.9
VCAN-212ENST00000515397 DHRS7CA6NNS2 312 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 RNASEK-C17orf49H0YIS7 233 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 ANGPTL7O43827 346 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 MPZL2O60487 215 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 NOS1APO75052 506 aaPredicted RBP9.43□□□□□ -0.9
VCAN-212ENST00000515397 GATBO75879 557 aaKnown RBP9.43□□□□□ -0.9
VCAN-212ENST00000515397 IGHA1P01876 353 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 LIMS3P0CW19 117 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 LIMS4P0CW20 117 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 ATF1P18846 271 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 MPZP25189 248 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 CFPP27918 469 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 MTCP1P56278 107 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 CAV3P56539 151 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 ERVK11-1P61568 191 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 COL10A1Q03692 680 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 PDCD1Q15116 288 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 AWAT1Q58HT5 328 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 OR2G6Q5TZ20 316 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 ZNF691Q5VV52 312 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 TMEM200BQ69YZ2 307 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 XAF1Q6GPH4 301 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 FDX2Q6P4F2 183 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 EGFL6Q8IUX8 553 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 OR5D18Q8NGL1 313 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 OR13C9Q8NGT0 318 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 C17orf50Q8WW18 174 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 CEP19Q96LK0 163 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 NKX1-2Q9UD57 310 aaPredicted RBP9.43□□□□□ -0.9
VCAN-212ENST00000515397 CLEC2DQ9UHP7 191 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 POLDIP2Q9Y2S7 368 aa9.43□□□□□ -0.9
VCAN-212ENST00000515397 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 H0YAE9 185 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 GPR37O15354 613 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 ZFPL1O95159 310 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 IGHV4-59P01825 116 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 MELTFP08582 738 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 GNAO1P09471 354 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 CCL3L1P16619 93 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 BCL3P20749 454 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 AZGP1P25311 298 aaKnown RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 SOX2P48431 317 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 CCR9P51686 369 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 ATP1B3P54709 279 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 ACTA2P62736 377 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 ACTG2P63267 376 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 ADARB1P78563 741 aaKnown RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 RAB40BQ12829 278 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 IL24Q13007 206 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 KLHL22Q53GT1 634 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 C16orf87Q6PH81 154 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 FIP1L1Q6UN15 594 aaKnown RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 Q6YL49 198 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 MKXQ8IYA7 352 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 CMTM4Q8IZR5 234 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 DHRSXQ8N5I4 330 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 ASCC1Q8N9N2 400 aaKnown RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 TNFRSF14Q92956 283 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms