RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 HCCSP53701 268 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 VSX2P58304 361 aaPredicted RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 PAFAH1B2P68402 229 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 RPL18AQ02543 176 aaKnown RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 CAPRIN1Q14444 709 aaKnown RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 ZNF266Q14584 549 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 AVPI1Q5T686 147 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 NCCRP1Q6ZVX7 275 aaPredicted RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 SNX20Q7Z614 316 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 TCAIMQ8N3R3 496 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 METTL13Q8N6R0 699 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 COX18Q8N8Q8 333 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 Q8N9W7 124 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 OR6K6Q8NGW6 343 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 RCN3Q96D15 328 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 ATP6V1G3Q96LB4 118 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
RFC1-216ENST00000514572 SYT4Q9H2B2 425 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 OR51B5Q9H339 312 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 PSTPIP2Q9H939 334 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 ANKHQ9HCJ1 492 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 CES1P1Q9UKY3 287 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 PATJQ8NI35 1801 aa3.4□□□□□ -1.87
RFC1-216ENST00000514572 KNL1Q8NG31 2342 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 CELSR3Q9NYQ7 3312 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 ASCC3Q8N3C0 2202 aaKnown RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 GREB1Q4ZG55 1949 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 UNC79Q9P2D8 2635 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 CYSRT1A8MQ03 144 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 DNASE2O00115 360 aaPredicted RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 HLA-DPB1P04440 258 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 BCHEP06276 602 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 PSMC3P17980 439 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 TCP1P17987 556 aaKnown RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 GNRHRP30968 328 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 CD70P32970 193 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 NDUFA8P51970 172 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 AP1S2P56377 157 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 CKAP4Q07065 602 aaKnown RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 DGCR6Q14129 220 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 GPR176Q14439 515 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 GINS1Q14691 196 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 MPPED2Q15777 294 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 CPTPQ5TA50 214 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 FAM92BQ6ZTR7 304 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 NDUFAF7Q7L592 441 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 RAB43Q86YS6 212 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 C12orf56Q8IXR9 622 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 LGALS14Q8TCE9 139 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 ZFP90Q8TF47 636 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 ABHD3Q8WU67 409 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 HDHD3Q9BSH5 251 aaPredicted RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 OSBPL11Q9BXB4 747 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 SPZ1Q9BXG8 430 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 SPNS1Q9H2V7 528 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 PDFQ9HBH1 243 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 NOX3Q9HBY0 568 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 TREX1Q9NSU2 369 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 SMAD5-AS1Q9Y6J3 95 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 V9GYY9 64 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 TP53BP1Q12888 1972 aaPredicted RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 CLUHO75153 1309 aa3.39□□□□□ -1.87
RFC1-216ENST00000514572 URB1O60287 2271 aaKnown RBP3.39□□□□□ -1.87
RFC1-216ENST00000514572 SPTAN1Q13813 2472 aaKnown RBP3.38□□□□□ -1.87
RFC1-216ENST00000514572 ZNF462Q96JM2 2506 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 USP9XQ93008 2570 aaPredicted RBP3.38□□□□□ -1.87
RFC1-216ENST00000514572 IGKV6D-21A0A0A0MT36 114 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 IGHV5-51A0A0C4DH38 117 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 A0A1B0GVX0 72 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 SYCE1LA8MT33 242 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 DFFAO00273 331 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 POLR3GO15318 223 aaPredicted RBP3.38□□□□□ -1.87
RFC1-216ENST00000514572 CYTH3O43739 400 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 ALOX12BO75342 701 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 ZMPSTE24O75844 475 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 TLX1NBP0CAT3 122 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 PRPS2P11908 318 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 TCN2P20062 427 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
RFC1-216ENST00000514572 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
RFC1-216ENST00000514572 UBE2AP49459 152 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 UBE2NP61088 152 aaKnown RBP3.38□□□□□ -1.87
RFC1-216ENST00000514572 TNNC1P63316 161 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 XRCC4Q13426 336 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 TNXAQ16473 311 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 NDUFAF6Q330K2 333 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 CLLU1OSQ5K130 101 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 OR2T5Q6IEZ7 315 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 TMEM205Q6UW68 189 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 Q8N976 141 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 OR6N2Q8NGY6 317 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 OR2T29Q8NH02 315 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 TMEM234Q8WY98 164 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 TEAD3Q99594 435 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 ACBD6Q9BR61 282 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 SYNDIG1Q9H7V2 258 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 EDA2RQ9HAV5 297 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms