RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 POLDIP2Q9Y2S7 368 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 H0YAE9 185 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 ZFPL1O95159 310 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 ATF1P18846 271 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 ETV1P50549 477 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 MRPL28Q13084 256 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 IL18R1Q13478 541 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 METTL11BQ5VVY1 283 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 LAIR2Q6ISS4 152 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 RBMS3Q6XE24 437 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 BRD3OSQ6XYD6 125 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 C1orf122Q6ZSJ8 110 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 Q8N7P7 452 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 OR51A4Q8NGJ6 313 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 NPRL2Q8WTW4 380 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 GGHQ92820 318 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 C1orf147Q96MC9 270 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 PLEKHA1Q9HB21 404 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 NKX1-2Q9UD57 310 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 KPTNQ9Y664 436 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 HSPE1-MOB4S4R3N1 261 aa13.29□□□□□ -0.28
PDLIM5-216ENST00000511767 TRAV40A0A0B4J280 105 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 NKX6-3A6NJ46 265 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 NXPH2O95156 264 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 NDUFB7P17568 137 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 RBP2P50120 134 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 GTF2A1P52655 376 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 GBX2P52951 348 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 ATP1B3P54709 279 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 UBA52P62987 128 aaKnown RBP13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 PDCD1Q15116 288 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 SMIM21Q3B7S5 101 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 GPR157Q5UAW9 335 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 ZNF676Q8N7Q3 588 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 BORCS8Q96FH0 119 aa13.28□□□□□ -0.28
PDLIM5-216ENST00000511767 ALX3O95076 343 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 MT-ND2P03891 347 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 RPSAP08865 295 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 GNAO1P09471 354 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 PRKACBP22694 351 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 PRTN3P24158 256 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 CAPGP40121 348 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 MTCP1P56278 107 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 BAMBIQ13145 260 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 BATF2Q8N1L9 274 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 SETD9Q8NE22 299 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 TFAP2CQ92754 450 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 LHX4Q969G2 390 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 PDCD1LG2Q9BQ51 273 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 BABAM2Q9NXR7 383 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 CLEC2DQ9UHP7 191 aa13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 DIMT1Q9UNQ2 313 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 CAB39Q9Y376 341 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 SIRT4Q9Y6E7 314 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-216ENST00000511767 IGHV1-69DA0A0B4J2H0 117 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 TRBV2A0A0J9YWF9 115 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 OGG1O15527 345 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 KNG1P01042 644 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 IGHV1-69P01742 117 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF20P17024 532 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 AZGP1P25311 298 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 SLC34A1Q06495 639 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 CNN3Q15417 329 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 SLC9A3R2Q15599 337 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 DEFB112Q30KQ8 113 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 CCDC58Q4VC31 144 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 XAF1Q6GPH4 301 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 CRIP3Q6Q6R5 217 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 SLC25A26Q70HW3 274 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF561Q8N587 486 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 OR5AK2Q8NH90 309 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 HAVCR2Q8TDQ0 301 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 TNFRSF14Q92956 283 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 CEP19Q96LK0 163 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 ZCCHC4Q9H5U6 513 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 SEBOXQ9HB31 216 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 PLCXD1Q9NUJ7 323 aa13.26□□□□□ -0.29
PDLIM5-216ENST00000511767 IRGMA1A4Y4 181 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 TMEM212A6NML5 194 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 CLDN34H7C241 214 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 INMTO95050 263 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 CCDC159P0C7I6 412 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 NPBWR2P48146 333 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 CEBPDP49716 269 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 PDZK1IP1Q13113 114 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 RUSC1-AS1Q66K80 236 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 Q6YL49 198 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 TMPRSS11AQ6ZMR5 421 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 VMO1Q7Z5L0 202 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms