RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	NUP107	P57740	925 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	RGS8	P57771	180 aa	Predicted RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	KRTAP10-8	P60410	259 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SPIB	Q01892	262 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	FOXF1	Q12946	379 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SELENBP1	Q13228	472 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	GPR50	Q13585	617 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TRAM2	Q15035	370 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	QPRT	Q15274	297 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	EXOC3L2	Q2M3D2	409 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	NDUFAF6	Q330K2	333 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	KCTD21	Q4G0X4	260 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF506	Q5JVG8	444 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	RBM48	Q5RL73	367 aa	Known RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ATAD3C	Q5T2N8	411 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	MRPL2	Q5T653	305 aa	Known RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	C1orf185	Q5T7R7	199 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF691	Q5VV52	312 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ULK3	Q6PHR2	472 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF550	Q7Z398	422 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	GRINA	Q7Z429	371 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	YRDC	Q86U90	279 aa	Known RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	VRK2	Q86Y07	508 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	RBM45	Q8IUH3	476 aa	Known RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	HS3ST5	Q8IZT8	346 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC43A2	Q8N370	569 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CLDN22	Q8N7P3	220 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	RELL2	Q8NC24	303 aa	Predicted RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF555	Q8NEP9	628 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	BEST4	Q8NFU0	473 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR10G2	Q8NGC3	310 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR4D11	Q8NGI4	311 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR1B1	Q8NGR6	318 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR13C5	Q8NGS8	318 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR6F1	Q8NGZ6	308 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SGMS2	Q8NHU3	365 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	DNAJA4	Q8WW22	397 aa	Predicted RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	LIPH	Q8WWY8	451 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ACOT11	Q8WXI4	607 aa	Predicted RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC38A4	Q969I6	547 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	DTNBP1	Q96EV8	351 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC41A3	Q96GZ6	507 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZFP3	Q96NJ6	502 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	MBOAT4	Q96T53	435 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	PITX2	Q99697	317 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	APOL4	Q9BPW4	351 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TTYH2	Q9BSA4	534 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TBL1XR1	Q9BZK7	514 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	DEFB127	Q9H1M4	99 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	PTGES2	Q9H7Z7	377 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	RNF122	Q9H9V4	155 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	PLEKHA3	Q9HB20	300 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	YAE1D1	Q9NRH1	226 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	VNN3	Q9NY84	501 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	IL20	Q9NYY1	176 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	KLRF1	Q9NZS2	232 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	MED11	Q9P086	117 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	PDP1	Q9P0J1	537 aa	Predicted RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF346	Q9UL40	294 aa	Known RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	POFUT2	Q9Y2G5	429 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC6A5	Q9Y345	797 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF337	Q9Y3M9	751 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165		V9GYQ6	96 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SACS	Q9NZJ4	4579 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A087WUJ7	227 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A087WXM4	84 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	LOC102725191	A0A1B0GVB3	256 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A1B0GWA3	101 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF716	A6NP11	495 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	CHP2	O43745	196 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR10H3	O60404	316 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	SS18L1	O75177	396 aa	Predicted RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	KRTAP5-8	O75690	187 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	RCBTB2	O95199	551 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	TGM6	O95932	706 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	RPSA	P08865	295 aa	Known RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	PNMT	P11086	282 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	HPGD	P15428	266 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	PGC	P20142	388 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	CRHBP	P24387	322 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	FKBP2	P26885	142 aa	Known RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	GGT2	P36268	569 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	POLR2I	P36954	125 aa	Known RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	RPL5	P46777	297 aa	Known RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	OMP	P47874	163 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	NPBWR1	P48145	328 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	STAR	P49675	285 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	CRISP1	P54107	249 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	CTBP2	P56545	445 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	TAS2R41	P59536	307 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	COPZ1	P61923	177 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	SNRPG	P62308	76 aa	Known RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	CDK5	Q00535	292 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	MYBPC1	Q00872	1141 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	PLGLB1	Q02325	96 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	PRKCD	Q05655	676 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	PPP1R8	Q12972	351 aa	Known RBP	3	□□□□□ -1.93
NFKB1-208	ENST00000509165	TSPAN31	Q12999	210 aa		3	□□□□□ -1.93
NFKB1-208	ENST00000509165	PTGES3	Q15185	160 aa	Known RBP	3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms