RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	BARHL1	Q9BZE3	327 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	BPESC1	Q9GZL8	116 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	CNTD2	Q9H8S5	307 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	CHODL	Q9H9P2	273 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	PLEKHA1	Q9HB21	404 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	SEBOX	Q9HB31	216 aa	Predicted RBP	4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM138	Q9NPI0	162 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	UFSP2	Q9NUQ7	469 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	IL36G	Q9NZH8	169 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	IL36RN	Q9UBH0	155 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	CTSZ	Q9UBR2	303 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	DUX4	Q9UBX2	424 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	PPP1R3C	Q9UQK1	317 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	WIPI2	Q9Y4P8	454 aa		4.13	□□□□□ -1.75
LMNB1-208	ENST00000504788	ANXA2P2	A6NMY6	339 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM14DP	A8MWL7	114 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	NDUFS8	O00217	210 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	AKR7A2	O43488	359 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SPRY1	O43609	319 aa	Predicted RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ANGPTL7	O43827	346 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF737	O75373	536 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	TFF1	P04155	84 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	MAS1	P04201	325 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	GRP	P07492	148 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	CLEC2L	P0C7M8	214 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	PRKACB	P22694	351 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	MAPK3	P27361	379 aa	Predicted RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	CALR	P27797	417 aa	Known RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	BDKRB2	P30411	391 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SDC2	P34741	201 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	GNAL	P38405	381 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	RPS19	P39019	145 aa	Known RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	PTGFR	P43088	359 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	NR4A2	P43354	598 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	MTNR1B	P49286	362 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	NCS1	P62166	190 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	PLA2G7	Q13093	441 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	UNC119	Q13432	240 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF146	Q15072	292 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	CNN3	Q15417	329 aa	Known RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	HSD17B12	Q53GQ0	312 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	NHLRC3	Q5JS37	347 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	DDI2	Q5TDH0	399 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SIGIRR	Q6IA17	410 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	LYPD2	Q6UXB3	125 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ACP7	Q6ZNF0	438 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF788	Q6ZQV5	615 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	LHFPL2	Q6ZUX7	228 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SAXO1	Q8IYX7	474 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	CD177	Q8N6Q3	437 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	C19orf18	Q8NEA5	215 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR5D18	Q8NGL1	313 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR8S1	Q8NH09	359 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	ANGPTL6	Q8NI99	470 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	CCL17	Q92583	94 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	THRSP	Q92748	146 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	RFT1	Q96AA3	541 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	BORCS8	Q96FH0	119 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	MICU1	Q9BPX6	476 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	CHCHD6	Q9BRQ6	235 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM246	Q9BRR3	403 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	UQCC2	Q9BRT2	126 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SHARPIN	Q9H0F6	387 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SMURF1	Q9HCE7	757 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	SNTG1	Q9NSN8	517 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	RBFOX1	Q9NWB1	397 aa	Known RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	C14orf119	Q9NWQ9	140 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	C1orf123	Q9NWV4	160 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	RNF7	Q9UBF6	113 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	KAAG1	Q9UBP8	84 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	FBLN5	Q9UBX5	448 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	NOP16	Q9Y3C1	178 aa	Known RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	AK6	Q9Y3D8	172 aa	Known RBP	4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	MAB21L2	Q9Y586	359 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	NPTN	Q9Y639	398 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788	WNK2	Q9Y3S1	2297 aa		4.12	□□□□□ -1.75
LMNB1-208	ENST00000504788		A0A0A6YYD4	124 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FAM230A	A0A1W2PPH8	454 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	IFITM5	A6NNB3	132 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SLC17A2	O00624	439 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	AIRE	O43918	545 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ARL6IP5	O75915	188 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CDRT1	O95170	752 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF205	O95201	554 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	IGHV2-5	P01817	119 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	WNT2	P09544	360 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	VSIG8	P0DPA2	414 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PSG2	P11465	335 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF20	P17024	532 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	BCL3	P20749	454 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	LMO1	P25800	156 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF93	P35789	620 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ART1	P52961	327 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	MTCP1	P56278	107 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CAV3	P56539	151 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SEC61A1	P61619	476 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms