RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 RFPL4AA6NLU0 287 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 TMEM212A6NML5 194 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 RFPL4AL1F8VTS6 287 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 SLC1A7O00341 560 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 SELLP14151 372 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 DCKP27707 260 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 RBP2P50120 134 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 ATP1B3P54709 279 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 ERVK11-1P61568 191 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 UBA52P62987 128 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 SMN1Q16637 294 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 OGFRL1Q5TC84 451 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 ZNF561Q8N587 486 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 GATAD2BQ8WXI9 593 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 SPSB1Q96BD6 273 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 ZNF48Q96MX3 618 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 COMMD4Q9H0A8 199 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 VCXQ9H320 206 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 ISG20L2Q9H9L3 353 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 NEK6Q9HC98 313 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 ONECUT1Q9UBC0 465 aa17.47■□□□□ 0.39
TRAPPC11-203ENST00000504526 DNHD1Q96M86 4753 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 TRBV23-1A0A0A0MS06 115 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 CENPVL3A0A0U1RRI6 287 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 CLIC3O95833 236 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 KNG1P01042 644 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 PRDX2P32119 198 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 ACTG1P63261 375 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 ADARB1P78563 741 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 GABPB1Q06547 395 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 BAMBIQ13145 260 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 BRD3OSQ6XYD6 125 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 ZNRF1Q8ND25 227 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 TMEM185AQ8NFB2 350 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 OR13C3Q8NGS6 347 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 CEP19Q96LK0 163 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 DCLRE1BQ9H816 532 aa17.46■□□□□ 0.39
TRAPPC11-203ENST00000504526 ANKRD65E5RJM6 399 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 H0YAE9 185 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 CYB5AP00167 134 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 TFF1P04155 84 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 OCM2P0CE71 109 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 OCMP0CE72 109 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 LIMS3P0CW19 117 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 LIMS4P0CW20 117 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 ATF1P18846 271 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 PRTN3P24158 256 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 CAPZA1P52907 286 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 METAP1DQ6UB28 335 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 TMPRSS11AQ6ZMR5 421 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 C1orf122Q6ZSJ8 110 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 LHFPL2Q6ZUX7 228 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 VMO1Q7Z5L0 202 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 MKXQ8IYA7 352 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 Q8IYB0 196 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 OR5AK2Q8NH90 309 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 CNIH3Q8TBE1 160 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 LHX4Q969G2 390 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 PRDM13Q9H4Q3 707 aa17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 CAB39Q9Y376 341 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC11-203ENST00000504526 IGKV1-27A0A075B6S5 117 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 IGHV1-69DA0A0B4J2H0 117 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 IGKV1-9A0A0C4DH69 117 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 A0A1W2PQ09 198 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 DNAJC9-AS1A6NH13 148 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 CLDN34H7C241 214 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 IGHV1-69P01742 117 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 MT-ND2P03891 347 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 AZGP1P25311 298 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 CAPGP40121 348 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 MED21Q13503 144 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 BLMHQ13867 455 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 CCDC58Q4VC31 144 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 CD177Q8N6Q3 437 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 OR10AC1Q8NH08 325 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 OPALINQ96PE5 141 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 NOX4Q9NPH5 578 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 MTCH1Q9NZJ7 389 aa17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 DIMT1Q9UNQ2 313 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 EXOSC1Q9Y3B2 195 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-203ENST00000504526 TRBV2A0A0J9YWF9 115 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 M0R1W7 72 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 ZFPL1O95159 310 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 MYL12AP19105 171 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 MTCP1P56278 107 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 GUCA2AQ02747 115 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 SLC25A26Q70HW3 274 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 C8orf59Q8N0T1 100 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 OR51A4Q8NGJ6 313 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 GCDHQ92947 438 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 ZDHHC16Q969W1 377 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 FAM234AQ9H0X4 552 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 OR14J1Q9UGF5 321 aa17.43■□□□□ 0.38
TRAPPC11-203ENST00000504526 A0A1W2PPH5 198 aa17.42■□□□□ 0.38
TRAPPC11-203ENST00000504526 TMEM89A2RUT3 159 aa17.42■□□□□ 0.38
TRAPPC11-203ENST00000504526 E9PI62 339 aa17.42■□□□□ 0.38
TRAPPC11-203ENST00000504526 ALX3O95076 343 aa17.42■□□□□ 0.38
TRAPPC11-203ENST00000504526 DEFB112Q30KQ8 113 aa17.42■□□□□ 0.38
TRAPPC11-203ENST00000504526 RPL22L1Q6P5R6 122 aaKnown RBP17.42■□□□□ 0.38
TRAPPC11-203ENST00000504526 FIP1L1Q6UN15 594 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms