RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PRRC2BQ5JSZ5 2229 aaKnown RBP1.05□□□□□ -2.24
SMC4-227ENST00000497984 LTBP2Q14767 1821 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 A0A1B0GU33 70 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 SUPT3HB4E1H0 165 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 H3BN98 237 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 PTTG1O95997 202 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 TUBG1P23258 451 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 GNRHRP30968 328 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 CLDN6P56747 220 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 ITPRIPQ8IWB1 547 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 CMTM8Q8IZV2 173 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 COMMD1Q8N668 190 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 FXYD5Q96DB9 178 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 SLC25A44Q96H78 314 aaPredicted RBP1.04□□□□□ -2.24
SMC4-227ENST00000497984 MTG1Q9BT17 334 aaPredicted RBP1.04□□□□□ -2.24
SMC4-227ENST00000497984 C8orf33Q9H7E9 229 aaPredicted RBP1.04□□□□□ -2.24
SMC4-227ENST00000497984 ZC4H2Q9NQZ6 224 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 TUBG2Q9NRH3 451 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 TMEM38BQ9NVV0 291 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 MRPL22Q9NWU5 206 aaKnown RBP1.04□□□□□ -2.24
SMC4-227ENST00000497984 DDX19BQ9UMR2 479 aa1.04□□□□□ -2.24
SMC4-227ENST00000497984 LEUTXA8MZ59 168 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 HACD1B0YJ81 288 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 J3QT63 122 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 TRDMT1O14717 391 aaKnown RBP1.03□□□□□ -2.24
SMC4-227ENST00000497984 CASQ2O14958 399 aaPredicted RBP1.03□□□□□ -2.24
SMC4-227ENST00000497984 AKR7A2O43488 359 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 PAX6P26367 422 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 ARL2P36404 184 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 PSMB2P49721 201 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 CCL23P55773 120 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 MTPNP58546 118 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 SLC35A1P78382 337 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 TPRG1LQ5T0D9 272 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 KCTD16Q68DU8 428 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 PRNTQ86SH4 94 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 LYPD6Q86Y78 171 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 LINC00337Q8N6G1 96 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 CYB561A3Q8NBI2 242 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 ZNF555Q8NEP9 628 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 GLYATL2Q8WU03 294 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 TMEM234Q8WY98 164 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.03□□□□□ -2.241e-8■■■■■ 268.2
SMC4-227ENST00000497984 NAT6Q93015 286 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 TRIB3Q96RU7 358 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 OR2AG1Q9H205 316 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 VPS37BQ9H9H4 285 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 CYP3A43Q9HB55 503 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 ZMAT5Q9UDW3 170 aaKnown RBP1.03□□□□□ -2.24
SMC4-227ENST00000497984 ZNF443Q9Y2A4 671 aaPredicted RBP1.03□□□□□ -2.24
SMC4-227ENST00000497984 RHBDD3Q9Y3P4 386 aa1.03□□□□□ -2.24
SMC4-227ENST00000497984 TRAV8-4A0A0B4J246 113 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 G3V3Q6 166 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 HSBP1O75506 76 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 P01737 135 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 HOXB8P17481 243 aaPredicted RBP1.02□□□□□ -2.25
SMC4-227ENST00000497984 GABRR2P28476 465 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 HTR2BP41595 481 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 MAGEA1P43355 309 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 YWHAEP62258 255 aaKnown RBP1.02□□□□□ -2.25
SMC4-227ENST00000497984 DHRS2Q13268 280 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 AMN1Q8IY45 258 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 Q8NAQ8 132 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 GPX8Q8TED1 209 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 BAALCQ8WXS3 180 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 OR8D1Q8WZ84 308 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 TNFRSF14Q92956 283 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 RAD51AP1Q96B01 352 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 TSGA10Q9BZW7 698 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 ADA2Q9NZK5 511 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 TAC3Q9UHF0 121 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 KLF12Q9Y4X4 402 aa1.02□□□□□ -2.25
SMC4-227ENST00000497984 KMT2BQ9UMN6 2715 aaPredicted RBP1.02□□□□□ -2.25
SMC4-227ENST00000497984 IGHV3-21A0A0B4J1V1 117 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 IGHV2OR16-5A0A0B4J2B6 119 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 ZNF729A6NN14 1252 aaPredicted RBP1.01□□□□□ -2.25
SMC4-227ENST00000497984 K7EPK0 472 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 DFFAO00273 331 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 UPK1AO00322 258 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 NDUFS5O43920 106 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 GCGP01275 180 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 CDK1P06493 297 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 KLK1P06870 262 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 PMCHP20382 165 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 CLDN8P56748 225 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 LCN2P80188 198 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 RAB11BQ15907 218 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 PLCXD3Q63HM9 321 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 ZNF322Q6U7Q0 402 aaPredicted RBP1.01□□□□□ -2.25
SMC4-227ENST00000497984 EPGNQ6UW88 154 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 FAM231DQ6ZW35 169 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 MRPL21Q7Z2W9 205 aaKnown RBP1.01□□□□□ -2.25
SMC4-227ENST00000497984 LYZL2Q7Z4W2 148 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 VTCN1Q7Z7D3 282 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 PIH1D2Q8WWB5 315 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 ING5Q8WYH8 240 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 APOBEC3DQ96AK3 386 aaPredicted RBP1.01□□□□□ -2.25
SMC4-227ENST00000497984 ZNF707Q96C28 371 aaPredicted RBP1.01□□□□□ -2.25
SMC4-227ENST00000497984 SPACA5Q96QH8 159 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 FADS3Q9Y5Q0 445 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms