RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 EBF4Q9BQW3 602 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 ZNF702PQ9H963 129 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 ISG20L2Q9H9L3 353 aaKnown RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 ZNF226Q9NYT6 803 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 TMEM9Q9P0T7 183 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 OPN4Q9UHM6 478 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 NDRG2Q9UN36 371 aaKnown RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 PSG8Q9UQ74 426 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 ABCC11Q96J66 1382 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 THOC2Q8NI27 1593 aaKnown RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 IGKV6D-21A0A0A0MT36 114 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 CIB4A0PJX0 185 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 RBFOX3A6NFN3 312 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 ACOX3O15254 700 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 SPAG7O75391 227 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 MOSP00540 346 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 PCCAP05165 728 aaPredicted RBP3.31□□□□□ -1.88
SNX13-211ENST00000496855 FABP1P07148 127 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 TCN2P20062 427 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 CBX5P45973 191 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 MTPNP58546 118 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 INCA1Q0VD86 236 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 QPRTQ15274 297 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 SLC25A35Q3KQZ1 300 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 OGFRL1Q5TC84 451 aaPredicted RBP3.31□□□□□ -1.88
SNX13-211ENST00000496855 FBXW9Q5XUX1 488 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 LRRN1Q6UXK5 716 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 AKAP14Q86UN6 197 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 TRAPPC5Q8IUR0 188 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 LGI3Q8N145 548 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 GPR32P1Q8NGA4 272 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 OR11H7Q8NGC8 314 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 PIGXQ8TBF5 258 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 SRSF12Q8WXF0 261 aaKnown RBP3.31□□□□□ -1.88
SNX13-211ENST00000496855 TESCQ96BS2 214 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 GALNT14Q96FL9 552 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 BIRC8Q96P09 236 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 PLEKHF1Q96S99 279 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 DOK1Q99704 481 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 TAPBPLQ9BX59 468 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 SAMD10Q9BYL1 202 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 ZDHHC11Q9H8X9 412 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 XPNPEP1Q9NQW7 623 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 SIGLEC7Q9Y286 467 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 ORC6Q9Y5N6 252 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 SLC22A7Q9Y694 548 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 C9orf84Q5VXU9 1444 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 TMEM131Q92545 1883 aa3.31□□□□□ -1.88
SNX13-211ENST00000496855 ARAP1Q96P48 1450 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 IGKV1-27A0A075B6S5 117 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 F5H5K5 113 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 H3BNH8 94 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 KCNK1O00180 336 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 TAAR5O14804 337 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 TRBV12-3P01733 135 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 IFNA16P05015 189 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 HIST1H1EP10412 219 aaKnown RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 ICAM2P13598 275 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 CD1EP15812 388 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 COX7A1P24310 79 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 MYL9P24844 172 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 OR3A4PP47883 348 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 GCLMP48507 274 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 CDKN2DP55273 166 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 PFN3P60673 137 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 SRSF6Q13247 344 aaKnown RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 TMEM176BQ3YBM2 270 aaPredicted RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 CDNFQ49AH0 187 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 CST9Q5W186 159 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 ZNF493Q6ZR52 646 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 HSD17B13Q7Z5P4 300 aaPredicted RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 RIMKLAQ8IXN7 391 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 CADM2Q8N3J6 435 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 GATD1Q8NB37 220 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 NEIL3Q8TAT5 605 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 STOML3Q8TAV4 291 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 BLNKQ8WV28 456 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 C22orf15Q8WYQ4 148 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 PPCDCQ96CD2 204 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 HAUS1Q96CS2 278 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 SEH1LQ96EE3 360 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 WFIKKN1Q96NZ8 548 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 TEAD3Q99594 435 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 TMED9Q9BVK6 235 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 SLC25A39Q9BZJ4 359 aaPredicted RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 POLR2J2Q9GZM3 115 aaKnown RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 SLC22A4Q9H015 551 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 PLGRKTQ9HBL7 147 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 MED4Q9NPJ6 270 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 FBXO6Q9NRD1 293 aaPredicted RBP3.3□□□□□ -1.88
SNX13-211ENST00000496855 NEUROG3Q9Y4Z2 214 aa3.3□□□□□ -1.88
SNX13-211ENST00000496855 A0A0G2JN53 185 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 RTL8CO15255 209 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms