RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	UTS2B	Q765I0	119 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	ZNF485	Q8NCK3	441 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	RPS4Y2	Q8TD47	263 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	C22orf15	Q8WYQ4	148 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	RGP1	Q92546	391 aa	Predicted RBP	13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	BORCS8	Q96FH0	119 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	NRIP2	Q9BQI9	281 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	PKIB	Q9C010	78 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	OCEL1	Q9H607	264 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	RASL12	Q9NYN1	266 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	MTCH1	Q9NZJ7	389 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	CNOT2	Q9NZN8	540 aa	Known RBP	13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	MAB21L2	Q9Y586	359 aa		13.1	□□□□□ -0.31
PRKCZ-222	ENST00000496325	IGHV3OR16-10	A0A075B7F0	116 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	EFCAB10	A6NFE3	127 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	RFPL4A	A6NLU0	287 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	RFPL4AL1	F8VTS6	287 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	OGG1	O15527	345 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	ENSA	O43768	121 aa	Known RBP	13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	ACAA1	P09110	424 aa	Predicted RBP	13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	AZGP1	P25311	298 aa	Known RBP	13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	CEBPD	P49716	269 aa	Predicted RBP	13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	FGF12	P61328	243 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	ERVK11-1	P61568	191 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	IL24	Q13007	206 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	CNN3	Q15417	329 aa	Known RBP	13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	ARMCX4	Q5H9R4	360 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	C6orf141	Q5SZD1	244 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	RPL22L1	Q6P5R6	122 aa	Known RBP	13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	TEX29	Q8N6K0	151 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	CD177	Q8N6Q3	437 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	ZNRF1	Q8ND25	227 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	DNAAF1	Q8NEP3	725 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	OR52N1	Q8NH53	320 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	SGMS2	Q8NHU3	365 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	SLAMF9	Q96A28	289 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	SPACA5	Q96QH8	159 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	COMMD4	Q9H0A8	199 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	DNTTIP1	Q9H147	329 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	HES4	Q9HCC6	221 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	FKBP14	Q9NWM8	211 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	BABAM2	Q9NXR7	383 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	POLDIP2	Q9Y2S7	368 aa		13.09	□□□□□ -0.31
PRKCZ-222	ENST00000496325	NKX6-3	A6NJ46	265 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SIGLEC5	O15389	551 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	NXPH2	O95156	264 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ATP6V1G2	O95670	118 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	IGHV4-38-2	P0DP08	117 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	RBP2	P50120	134 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ATP1B3	P54709	279 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	IL13RA1	P78552	427 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	CCDC58	Q4VC31	144 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	CRIP3	Q6Q6R5	217 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SLC25A26	Q70HW3	274 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	BCL6B	Q8N143	479 aa	Predicted RBP	13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	STX19	Q8N4C7	294 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ZFP41	Q8N8Y5	198 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	OR13C9	Q8NGT0	318 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	HAVCR2	Q8TDQ0	301 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SGCD	Q92629	289 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	RFT1	Q96AA3	541 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	UPRT	Q96BW1	309 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	MED30	Q96HR3	178 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	OPALIN	Q96PE5	141 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ZCCHC4	Q9H5U6	513 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ELL3	Q9HB65	397 aa	Predicted RBP	13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	CHCHD3	Q9NX63	227 aa	Known RBP	13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ZNF69	Q9UC07	566 aa		13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SOX21	Q9Y651	276 aa	Predicted RBP	13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	PRKDC	P78527	4128 aa	Known RBP	13.08	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ZNF879	B4DU55	563 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SLC1A7	O00341	560 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ECD	O95905	644 aa	Predicted RBP	13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SFTPB	P07988	381 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	MMP9	P14780	707 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	PRKACB	P22694	351 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	NPBWR2	P48146	333 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SOX2	P48431	317 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	MTCP1	P56278	107 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ARF6	P62330	175 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	DEFA6	Q01524	100 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SMIM21	Q3B7S5	101 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	LRRC10	Q5BKY1	277 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	ASPHD2	Q6ICH7	369 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	PARP16	Q8N5Y8	322 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	LY6G5B	Q8NDX9	201 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	TSEN15	Q8WW01	171 aa	Known RBP	13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SDSL	Q96GA7	329 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SLC6A7	Q99884	636 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	DCTN5	Q9BTE1	182 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	NUP50	Q9UKX7	468 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	DHDH	Q9UQ10	334 aa		13.07	□□□□□ -0.32
PRKCZ-222	ENST00000496325	TRAV40	A0A0B4J280	105 aa		13.06	□□□□□ -0.32
PRKCZ-222	ENST00000496325	PTGES3L	E9PB15	166 aa		13.06	□□□□□ -0.32
PRKCZ-222	ENST00000496325	LIPF	P07098	398 aa		13.06	□□□□□ -0.32
PRKCZ-222	ENST00000496325	PPIAL4G	P0DN37	164 aa		13.06	□□□□□ -0.32
PRKCZ-222	ENST00000496325	MYF6	P23409	242 aa		13.06	□□□□□ -0.32
PRKCZ-222	ENST00000496325	PRDX2	P32119	198 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms