RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 FAAP24Q9BTP7 215 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 TTTY12Q9BZ98 90 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PRRG4Q9BZD6 226 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 BCO1Q9HAY6 547 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 C1orf123Q9NWV4 160 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 MEMO1Q9Y316 297 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 MUC3AQ02505 3323 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 RPL36A-HNRNPH2H7BZ11 118 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 ADAP1O75689 374 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 IFNA2P01563 188 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 FGF2P09038 288 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 MAGEA5P43359 124 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PRSS12P56730 875 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PDZK1IP1Q13113 114 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 SNTB1Q13884 538 aaKnown RBP9.61□□□□□ -0.87
CMSS1-208ENST00000496116 ANKRD55Q3KP44 614 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PAN3Q58A45 887 aaKnown RBP9.61□□□□□ -0.87
CMSS1-208ENST00000496116 SGPP2Q8IWX5 399 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 RELL2Q8NC24 303 aaPredicted RBP9.61□□□□□ -0.87
CMSS1-208ENST00000496116 BVESQ8NE79 360 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 ADAMTS17Q8TE56 1095 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 C2orf50Q96LR7 162 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 DNTTIP1Q9H147 329 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 WDR13Q9H1Z4 485 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 SLC7A10Q9NS82 523 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 NECAP2Q9NVZ3 263 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 AK3Q9UIJ7 227 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 IGKV1D-8A0A087WSZ0 117 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 TEX13DA0A0J9YY54 714 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 A0A1W2PNU3 283 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 FAM166BA8MTA8 275 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 CDX4O14627 284 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 CTSDP07339 412 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 CELA3AP09093 270 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 EDN3P14138 238 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 RPS2P15880 293 aaKnown RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 CHATP28329 748 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 RBMXP38159 391 aaKnown RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 LINC00696Q6ZRV3 163 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 TUSC5Q8IXB3 177 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 CPEB3Q8NE35 698 aaKnown RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 OR51F2Q8NH61 342 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 FER1L6-AS2Q96M78 137 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF75AQ96N20 296 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 LINC00052Q96N35 136 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 HDHD3Q9BSH5 251 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-208ENST00000496116 C1QTNF6Q9BXI9 259 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 HES7Q9BYE0 225 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 CALHM2Q9HA72 323 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF850A8MQ14 1090 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 GEMIN2O14893 280 aaKnown RBP9.59□□□□□ -0.87
CMSS1-208ENST00000496116 FCGR3AP08637 254 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 OR5H8P0DN80 308 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 TPT1P13693 172 aaKnown RBP9.59□□□□□ -0.87
CMSS1-208ENST00000496116 ARF1P84077 181 aaKnown RBP9.59□□□□□ -0.87
CMSS1-208ENST00000496116 PRSS54Q6PEW0 395 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 COLCA1Q6ZS62 124 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 STOML3Q8TAV4 291 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 PIK3IP1Q96FE7 263 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 DMRTA2Q96SC8 542 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 RNF122Q9H9V4 155 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 DECR2Q9NUI1 292 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 KLF13Q9Y2Y9 288 aaPredicted RBP9.59□□□□□ -0.87
CMSS1-208ENST00000496116 IGKV1-12A0A0C4DH73 117 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF724A8MTY0 619 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 KLRC4-KLRK1H3BQV0 150 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 SCO1O75880 301 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 IGKV1D-12P01611 117 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 COX5BP10606 129 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 LYL1P12980 280 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 MALLQ13021 153 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 RNPS1Q15287 305 aaKnown RBP9.59□□□□□ -0.87
CMSS1-208ENST00000496116 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 FBXL14Q8N1E6 418 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 TMEM251Q8N6I4 163 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 NAXEQ8NCW5 288 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 GALNT11Q8NCW6 608 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 OR10AD1Q8NGE0 317 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 APH1AQ96BI3 265 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 SULT4A1Q9BR01 284 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 RNF126Q9BV68 326 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 PLA2G3Q9NZ20 509 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 PRR13Q9NZ81 148 aa9.59□□□□□ -0.87
CMSS1-208ENST00000496116 A0A096LPE4 126 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 A0A1W2PPZ6 126 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 F8VVB4 439 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 F8VWA3 439 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 HOXB5P09067 269 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 CCNOP22674 350 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 NAAAQ02083 359 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 PIGYQ3MUY2 71 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 DHRS11Q6UWP2 260 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 UNQ6126/PRO20091Q6UXV3 157 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 MCEMP1Q8IX19 187 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF611Q8N823 705 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 FNDC9Q8TBE3 224 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 OR10C1Q96KK4 312 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms