RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 HIST1H3AP68431 136 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 PIGYQ3MUY2 71 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 HIST2H3PS2Q5TEC6 136 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 ZNF774Q6NX45 483 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 HIST2H3AQ71DI3 136 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.33□□□□□ -0.59
PTPN7-217ENST00000495688 AKR1E2Q96JD6 320 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 SULT4A1Q9BR01 284 aa11.33□□□□□ -0.59
PTPN7-217ENST00000495688 FAM186AA6NE01 2351 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 CD5P06127 495 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 CTSDP07339 412 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 OR5AC1P0C628 307 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 NOVA1P51513 510 aaKnown RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 RSU1Q15404 277 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 PHLDA2Q53GA4 152 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 LYZL2Q7Z4W2 148 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 SECTM1Q8WVN6 248 aa11.33□□□□□ -0.6
PTPN7-217ENST00000495688 FOXD3Q9UJU5 478 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
PTPN7-217ENST00000495688 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 TAAR5O14804 337 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 MBPP02686 304 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 IGKV1-12A0A0C4DH73 117 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 C1QL1O75973 258 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 IGKV1D-12P01611 117 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 UMODP07911 640 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 LIFP15018 202 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 PPT1P50897 306 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 F2RL1P55085 397 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 NSUN5P2Q63ZY6 315 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 EIF5AL1Q6IS14 154 aaKnown RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 FOXL2NBQ6ZUU3 175 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 MAML2Q8IZL2 1156 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 SPEM1Q8N4L4 309 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 AKR7LQ8NHP1 331 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 SPTSSAQ969W0 71 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 ALKBH3Q96Q83 286 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 CRLF2Q9HC73 371 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 TUBD1Q9UJT1 453 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 ZNHIT1O43257 154 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 NME2P1O60361 137 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 IFNA21P01568 189 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 LCATP04180 440 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 FAM76BQ5HYJ3 339 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 OR5L1Q8NGL2 311 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 RTN4IP1Q8WWV3 396 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 KIRREL1Q96J84 757 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 C12orf57Q99622 126 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 WFDC1Q9HC57 220 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 DKKL1Q9UK85 242 aa11.32□□□□□ -0.6
PTPN7-217ENST00000495688 PTRH2Q9Y3E5 179 aaKnown RBP11.32□□□□□ -0.6
PTPN7-217ENST00000495688 CCDC187A0A096LP49 1063 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 K7ESF4 209 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 SGCEO43556 437 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 JTBO76095 146 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 B4GALT1P15291 398 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 CRYGSP22914 178 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF133P52736 654 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-217ENST00000495688 EIF5AP63241 154 aaKnown RBP11.31□□□□□ -0.6
PTPN7-217ENST00000495688 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 PEA15Q15121 130 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 TGIF1Q15583 401 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 PLXDC2Q6UX71 529 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 Q6ZPA2 131 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 OR10AD1Q8NGE0 317 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 METTL9Q9H1A3 318 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-217ENST00000495688 PARP11Q9NR21 331 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 DECR2Q9NUI1 292 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF407Q9C0G0 2248 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 A0A0G2JMM0 328 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 A0A1W2PPB8 328 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 A0A1W2PRS3 328 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 COLCA2A8K830 154 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 KIR3DP1A8MWS1 328 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 EIF1BO60739 113 aaKnown RBP11.31□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF728P0DKX0 622 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 NR2C1P13056 603 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 HOXA1P49639 335 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-217ENST00000495688 ASCL1P50553 236 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 Q6ZSR3 168 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 FGFBP3Q8TAT2 258 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 CLCC1Q96S66 551 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
PTPN7-217ENST00000495688 KIAA1549Q9HCM3 1950 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 FREM1Q5H8C1 2179 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 NCKAP5O14513 1909 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms