RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	FAM3A	P98173	230 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	TAF9	Q16594	264 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	PAN3	Q58A45	887 aa	Known RBP	13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	OR2M7	Q8NG81	312 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	METTL8	Q9H825	291 aa	Known RBP	13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	ZDBF2	Q9HCK1	2354 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	KCNAB3	O43448	404 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	S100A6	P06703	90 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	MMP7	P09237	267 aa	Predicted RBP	13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	ZNF92	Q03936	586 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	NRN1L	Q496H8	165 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	ABHD17B	Q5VST6	288 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	STOML3	Q8TAV4	291 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	PIK3IP1	Q96FE7	263 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	C2orf50	Q96LR7	162 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	FAAP24	Q9BTP7	215 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	BARX1	Q9HBU1	254 aa	Predicted RBP	13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	B4GALT7	Q9UBV7	327 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	ANXA10	Q9UJ72	324 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	SLC7A11	Q9UPY5	501 aa		13.32	□□□□□ -0.28
CALD1-222	ENST00000495522	IGKV3D-15	A0A087WSY6	115 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522		F8VVB4	439 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522		F8VWA3	439 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522		H0YIZ8	118 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	TERT	O14746	1132 aa	Known RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	XRCC2	O43543	280 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	NEURL1	O76050	574 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	KNG1	P01042	644 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	LYL1	P12980	280 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	DTYMK	P23919	212 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	FUT6	P51993	359 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	POLR2G	P62487	172 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	OR8B8	Q15620	311 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	PRSS54	Q6PEW0	395 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	UNQ6126/PRO20091	Q6UXV3	157 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	ZBTB44	Q8NCP5	570 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	MARC2	Q969Z3	335 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	USB1	Q9BQ65	265 aa	Known RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	GPR87	Q9BY21	358 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	FOXJ2	Q9P0K8	574 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	AK3	Q9UIJ7	227 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	MPTX1	A8MV57	137 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	TSPAN4	O14817	238 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	MRPL33	O75394	65 aa	Known RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	IFNA2	P01563	188 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	CTSD	P07339	412 aa	Predicted RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	HOXD4	P09016	255 aa	Predicted RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	CHAT	P28329	748 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	PTGER4	P35408	488 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	PPIA	P62937	165 aa	Known RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	IGSF11	Q5DX21	431 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	PABPC1L2A	Q5JQF8	200 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	TSPO2	Q5TGU0	170 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	ZNF600	Q6ZNG1	722 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	OR10C1	Q96KK4	312 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	TECTB	Q96PL2	329 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	SIGLEC12	Q96PQ1	595 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	CMSS1	Q9BQ75	279 aa	Known RBP	13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	SHARPIN	Q9H0F6	387 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	IL36G	Q9NZH8	169 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	DOCK10	Q96BY6	2186 aa		13.31	□□□□□ -0.28
CALD1-222	ENST00000495522	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	LNP1	A1A4G5	178 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	MSTN	O14793	375 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	PET100	P0DJ07	73 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	TPT1	P13693	172 aa	Known RBP	13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	RBMX	P38159	391 aa	Known RBP	13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	LHX2	P50458	406 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	PLCXD3	Q63HM9	321 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	OSR2	Q8N2R0	312 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	POC1A	Q8NBT0	407 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	SPSB4	Q96A44	273 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	MRPS24	Q96EL2	167 aa	Known RBP	13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	RRNAD1	Q96FB5	475 aa	Known RBP	13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	MICU1	Q9BPX6	476 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	C1QTNF5	Q9BXJ0	243 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	LINC00470	Q9BZP3	86 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	BCO1	Q9HAY6	547 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	C1orf123	Q9NWV4	160 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	ABI3	Q9P2A4	366 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	MEMO1	Q9Y316	297 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	IGKV1-12	A0A0C4DH73	117 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	C21orf140	B9A014	251 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	IGKV1D-12	P01611	117 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	IGHV3-9	P01782	118 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	OR5H8	P0DN80	308 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	EDN3	P14138	238 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	RFC3	P40938	356 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	HAAO	P46952	286 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	NAAA	Q02083	359 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	SRY	Q05066	204 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	PDZK1IP1	Q13113	114 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	TMEM164	Q5U3C3	297 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	SULT4A1	Q9BR01	284 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	PRDM14	Q9GZV8	571 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	PCDHB16	Q9NRJ7	776 aa		13.3	□□□□□ -0.28
CALD1-222	ENST00000495522	DECR2	Q9NUI1	292 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms