RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C12orf43Q96C57 262 aaKnown RBP10.49□□□□□ -0.73
SNX17-208ENST00000493711 MRPS24Q96EL2 167 aaKnown RBP10.49□□□□□ -0.73
SNX17-208ENST00000493711 CEP19Q96LK0 163 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 SPACA5Q96QH8 159 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 CST11Q9H112 138 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 LIME1Q9H400 295 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 RNF167Q9H6Y7 350 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 CNTD2Q9H8S5 307 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 CHODLQ9H9P2 273 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 STEAP1Q9UHE8 339 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 PLEKHA6Q9Y2H5 1048 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 MRPS28Q9Y2Q9 187 aaKnown RBP10.49□□□□□ -0.73
SNX17-208ENST00000493711 NPTNQ9Y639 398 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 CELSR1Q9NYQ6 3014 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 RTTNQ86VV8 2226 aa10.49□□□□□ -0.73
SNX17-208ENST00000493711 ABCA4P78363 2273 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 SHISA3A0PJX4 238 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 CLDN25C9JDP6 229 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 NDUFS8O00217 210 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 KDM4BO94953 1096 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 BPNT1O95861 308 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 CSTBP04080 98 aaKnown RBP10.48□□□□□ -0.73
SNX17-208ENST00000493711 PGA5P0DJD9 388 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 ARSBP15848 533 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 RPS19P39019 145 aaKnown RBP10.48□□□□□ -0.73
SNX17-208ENST00000493711 PDLIM4P50479 330 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 MXD1Q05195 221 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 MPPED2Q15777 294 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 SMIM21Q3B7S5 101 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 AWAT2Q6E213 333 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 ELP2Q6IA86 826 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 FAM166AQ6J272 317 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 SFXN4Q6P4A7 337 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 CDH24Q86UP0 819 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 CALHM1Q8IU99 346 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 LRRC29Q8WV35 223 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 ACOT12Q8WYK0 555 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 CCL17Q92583 94 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 RAB1CQ92928 201 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 NRIP2Q9BQI9 281 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 SMURF1Q9HCE7 757 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 ING4Q9UNL4 249 aa10.48□□□□□ -0.73
SNX17-208ENST00000493711 SETD2Q9BYW2 2564 aaPredicted RBP10.48□□□□□ -0.73
SNX17-208ENST00000493711 PLCE1Q9P212 2302 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 A0A0G2JK05 382 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 A6NHS1 94 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 SRRM5B3KS81 715 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 TMEM178BH3BS89 294 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 NDUFA2O43678 99 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 RP2O75695 350 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 NXPH2O95156 264 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 PLATP00750 562 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 LHBP01229 141 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 IGHV4-39P01824 125 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 CALCBP10092 127 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
SNX17-208ENST00000493711 ZNF182P17025 639 aaPredicted RBP10.47□□□□□ -0.73
SNX17-208ENST00000493711 CPT2P23786 658 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 PMELP40967 661 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 OR3A4PP47883 348 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 ERVK11-1P61568 191 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 DGUOKQ16854 277 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 GLIPR1L1Q6UWM5 242 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 OR2W3Q7Z3T1 314 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 Q8NFD4 153 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 OR5D18Q8NGL1 313 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 NDNFQ8TB73 568 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 NRGNQ92686 78 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 PTX4Q96A99 478 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 RFT1Q96AA3 541 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 GFI1Q99684 422 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 SEBOXQ9HB31 216 aaPredicted RBP10.47□□□□□ -0.73
SNX17-208ENST00000493711 ELL3Q9HB65 397 aaPredicted RBP10.47□□□□□ -0.73
SNX17-208ENST00000493711 MTCH1Q9NZJ7 389 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 CCDC59Q9P031 241 aaKnown RBP10.47□□□□□ -0.73
SNX17-208ENST00000493711 ABRACLQ9P1F3 81 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 FBLN5Q9UBX5 448 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 GLS2Q9UI32 602 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 NF1P21359 2839 aa10.47□□□□□ -0.73
SNX17-208ENST00000493711 CSMD2Q7Z408 3487 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 HEATR1Q9H583 2144 aaKnown RBP10.46□□□□□ -0.73
SNX17-208ENST00000493711 PPIAL4EA0A075B759 164 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 TRAV38-1A0A0B4J264 116 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 IGHV3-64DA0A0J9YX35 117 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 PPIAL4DF5H284 164 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 LGALS8O00214 317 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 SPRY1O43609 319 aaPredicted RBP10.46□□□□□ -0.73
SNX17-208ENST00000493711 SYNGR1O43759 233 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 SSX4O60224 188 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 CDC14BO60729 498 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 CLEC2LP0C7M8 214 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 PPIAL4FP0DN26 164 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 GTF2F2P13984 249 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 GLRA1P23415 457 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 COL8A2P25067 703 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 GIFP27352 417 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 OR10A3P58181 314 aa10.46□□□□□ -0.73
SNX17-208ENST00000493711 HNRNPA0Q13151 305 aaKnown RBP10.46□□□□□ -0.73
SNX17-208ENST00000493711 SPCS2Q15005 226 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms