RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TMEM171Q8WVE6 324 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 TNFAIP8L1Q8WVP5 186 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 HPSE2Q8WWQ2 592 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 RAB40AQ8WXH6 277 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 AUNIPQ9H7T9 357 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 HSPB11Q9Y547 144 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 PLCE1Q9P212 2302 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 PQLC2LA1A4F0 135 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 ECDO95905 644 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 UBBP0CG47 229 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 ANXA3P12429 323 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 ALDH3B1P43353 468 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 GPM6AP51674 278 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 CCR6P51684 374 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 GNG2P59768 71 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 SNRPD2P62316 118 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 NCMAPQ5T1S8 102 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 OR56B4Q8NH76 319 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 OR5P3Q8WZ94 311 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 DVL3Q92997 716 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 PTX4Q96A99 478 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 PHF21AQ96BD5 680 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 S100A16Q96FQ6 103 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 S100A13Q99584 98 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 KCNK15Q9H427 330 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 GHRLQ9UBU3 117 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF222Q9UK12 451 aa12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 NOP16Q9Y3C1 178 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-210ENST00000492909 NAP1L6A6NFF2 107 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 OR5B21A6NL26 309 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 GABARAPH6UMI1 98 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 LDLRAD4O15165 306 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 NAT2P11245 290 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 HTR2BP41595 481 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 ZP1P60852 638 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 OR8S1Q8NH09 359 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 PLPPR2Q96GM1 343 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 CA10Q9NS85 328 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 TMEM100Q9NV29 134 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 MYEF2Q9P2K5 600 aaKnown RBP12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 DUSP13Q9UII6 198 aa12.02□□□□□ -0.48
PDZRN3-210ENST00000492909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF732B4DXR9 585 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 IGHV3-13P01766 116 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 SULT1A3P0DMM9 295 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 SULT1A4P0DMN0 295 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 TMEM225BP0DP42 221 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 VSIG8P0DPA2 414 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 RAB6AP20340 208 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 MNDAP41218 407 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 EFNB2P52799 333 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 SELENOVP59797 346 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 GNG3P63215 75 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 PLA2G7Q13093 441 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 MSMPQ1L6U9 139 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 ADAM5Q6NVV9 412 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 OR2W3Q7Z3T1 314 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 GIMAP1Q8WWP7 306 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 SNAPC3Q92966 411 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 C1orf147Q96MC9 270 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 ADAT1Q9BUB4 502 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 RTL8AQ9BWD3 113 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 FGF23Q9GZV9 251 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 HRASLSQ9HDD0 168 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 NPDC1Q9NQX5 325 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 FBLN5Q9UBX5 448 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 ATP23Q9Y6H3 246 aa12.02□□□□□ -0.49
PDZRN3-210ENST00000492909 IGLV3-9A0A075B6K5 115 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 MEIKINA0A087WXM9 373 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 WIPF3A6NGB9 483 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 PLATP00750 562 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 AP3S2P59780 193 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 MRPS10P82664 201 aaKnown RBP12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 QRFPP83859 136 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 OR8G1Q15617 311 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 SLC22A6Q4U2R8 563 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 BEX5Q5H9J7 111 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 OR10K2Q6IF99 312 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 C1QL2Q7Z5L3 287 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 LRP11Q86VZ4 500 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 KCNG3Q8TAE7 436 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 MICU1Q9BPX6 476 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 CST11Q9H112 138 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 C20orf85Q9H1P6 137 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF442Q9H7R0 627 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 ELL3Q9HB65 397 aaPredicted RBP12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 RAB22AQ9UL26 194 aa12.01□□□□□ -0.49
PDZRN3-210ENST00000492909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12□□□□□ -0.49
PDZRN3-210ENST00000492909 TMEM14DPA8MWL7 114 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 SPRY1O43609 319 aaPredicted RBP12□□□□□ -0.49
PDZRN3-210ENST00000492909 CTAG2O75638 210 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 TPPPO94811 219 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 CD3EP07766 207 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms