RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 BCL3P20749 454 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 GLRA1P23415 457 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 GADD45AP24522 165 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
COPS3-210ENST00000492672 OR3A4PP47883 348 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 ERVK11-1P61568 191 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 IL24Q13007 206 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 DDI2Q5TDH0 399 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 TEX36Q5VZQ5 186 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 LYPD6Q86Y78 171 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 C1orf87Q8N0U7 546 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 POC1AQ8NBT0 407 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 OR51F2Q8NH61 342 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 ZNF671Q8TAW3 534 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 CCL13Q99616 98 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 GAL3ST1Q99999 423 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 NRIP2Q9BQI9 281 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 RBFOX1Q9NWB1 397 aaKnown RBP13.26□□□□□ -0.29
COPS3-210ENST00000492672 CTSZQ9UBR2 303 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 FOXJ3Q9UPW0 622 aa13.26□□□□□ -0.29
COPS3-210ENST00000492672 TRDV1A0A1B0GX56 115 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 CDRT1O95170 752 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 IGHV2-5P01817 119 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 ALDOBP05062 364 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 INHBBP09529 407 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 IGHV4-31P0DP07 118 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 SRMP19623 302 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 PPP3R1P63098 170 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 TMEM249Q2WGJ8 235 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 HSD17B12Q53GQ0 312 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 C22orf42Q6IC83 251 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 CD200R1LQ6Q8B3 271 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
COPS3-210ENST00000492672 ACP7Q6ZNF0 438 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 OR10K1Q8NGX5 313 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 C18orf12Q96KH6 178 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 GPER1Q99527 375 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 PATZ1Q9HBE1 687 aaKnown RBP13.25□□□□□ -0.29
COPS3-210ENST00000492672 LPAR2Q9HBW0 351 aa13.25□□□□□ -0.29
COPS3-210ENST00000492672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.25□□□□□ -0.293e-6■■■■■ 46.6
COPS3-210ENST00000492672 IGKV1D-17A0A075B6S4 117 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 NOS1APO75052 506 aaPredicted RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 SFTPBP07988 381 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 WNT2P09544 360 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 TMEM225BP0DP42 221 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 PSG2P11465 335 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 CD36P16671 472 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 ZFP36P26651 326 aaKnown RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 DUSP1P28562 367 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 ZNF93P35789 620 aaPredicted RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 TGFBR1P36897 503 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 SNU13P55769 128 aaKnown RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 TRAM1Q15629 374 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 TMEM155Q4W5P6 130 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 CD177Q8N6Q3 437 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 TNFAIP8L1Q8WVP5 186 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 YIPF6Q96EC8 236 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 CEP19Q96LK0 163 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 NEK6Q9HC98 313 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 HES4Q9HCC6 221 aa13.24□□□□□ -0.29
COPS3-210ENST00000492672 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 AK6Q9Y3D8 172 aaKnown RBP13.24□□□□□ -0.29
COPS3-210ENST00000492672 A0A1W2PP11 408 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 SMIM30A4D0T7 59 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 OR2AT4A6NND4 320 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 F5H0A9 414 aaPredicted RBP13.23□□□□□ -0.29
COPS3-210ENST00000492672 PHF1O43189 567 aaPredicted RBP13.23□□□□□ -0.29
COPS3-210ENST00000492672 NXPH2O95156 264 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 LY6G6DO95868 133 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 TFAP2AP05549 437 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 ACAA1P09110 424 aaPredicted RBP13.23□□□□□ -0.29
COPS3-210ENST00000492672 MAPK3P27361 379 aaPredicted RBP13.23□□□□□ -0.29
COPS3-210ENST00000492672 PDCD1Q15116 288 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 STUMQ69YW2 141 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 ZNF841Q6ZN19 808 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 FAM216BQ8N7L0 139 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 MSI2Q96DH6 328 aaKnown RBP13.23□□□□□ -0.29
COPS3-210ENST00000492672 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 KCNK15Q9H427 330 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 CNTD2Q9H8S5 307 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 SMURF1Q9HCE7 757 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 TCF7L1Q9HCS4 588 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 NLKQ9UBE8 527 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 DNAJB11Q9UBS4 358 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 PCDHB10Q9UN67 800 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 ING4Q9UNL4 249 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 TLN2Q9Y4G6 2542 aa13.23□□□□□ -0.29
COPS3-210ENST00000492672 DSCAML1Q8TD84 2053 aa13.22□□□□□ -0.29
COPS3-210ENST00000492672 TRAV38-1A0A0B4J264 116 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms