RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 IL34Q6ZMJ4 242 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 ZNF627Q7L945 461 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 LDLRAD3Q86YD5 345 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 GPR137CQ8N3F9 429 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 BPIFB2Q8N4F0 458 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 TCEANCQ8N8B7 351 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 SLC25A36Q96CQ1 311 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 KTI12Q96EK9 354 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-213ENST00000492506 OXGR1Q96P68 337 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 IL4I1Q96RQ9 567 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 FUZQ9BT04 418 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 PPIAL4AQ9Y536 164 aa11.15□□□□□ -0.62
HDAC3-213ENST00000492506 LOC102725191A0A1B0GVB3 256 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 F5H5P2 479 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 CDC14BO60729 498 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 AHSA1O95433 338 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 GASTP01350 101 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 CRYBA1P05813 215 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 IFNGR2P38484 337 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 PTGFRP43088 359 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 SSX2Q16385 188 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 MIDNQ504T8 468 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 LPCAT3Q6P1A2 487 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 NHLRC1Q6VVB1 395 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 SSX9Q7RTT3 188 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 WDFY1Q8IWB7 410 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 C20orf196Q8IYI0 205 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 SAMD12Q8N8I0 201 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF485Q8NCK3 441 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 ARL11Q969Q4 196 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 TMEM203Q969S6 136 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 C1orf147Q96MC9 270 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-213ENST00000492506 PFDN5Q99471 154 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 C1QTNF5Q9BXJ0 243 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 DUSP13Q9UII6 198 aa11.14□□□□□ -0.63
HDAC3-213ENST00000492506 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 BLOC1S5-TXNDC5H3BN57 136 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 H3BN98 237 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 SLC31A2O15432 143 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 IGHV2-5P01817 119 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 EIF4EP06730 217 aaKnown RBP11.13□□□□□ -0.63
HDAC3-213ENST00000492506 H1F0P07305 194 aaKnown RBP11.13□□□□□ -0.63
HDAC3-213ENST00000492506 NUDT7P0C024 238 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 NR2F1P10589 423 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 CD79AP11912 226 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 MTNR1AP48039 350 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 MVDP53602 400 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 ZP4Q12836 540 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 DOC2BQ14184 412 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 NKPD1Q17RQ9 610 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 DCAF12L2Q5VW00 463 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 SFXN4Q6P4A7 337 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF584Q8IVC4 421 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 SERPINA12Q8IW75 414 aa11.13□□□□□ -0.63
HDAC3-213ENST00000492506 PUSL1Q8N0Z8 303 aaKnown RBP11.13□□□□□ -0.63
HDAC3-213ENST00000492506 TRMT10AQ8TBZ6 339 aaKnown RBP11.13□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF346Q9UL40 294 aaKnown RBP11.13□□□□□ -0.63
HDAC3-213ENST00000492506 EXOGQ9Y2C4 368 aaKnown RBP11.13□□□□□ -0.63
HDAC3-213ENST00000492506 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 C17orf100A8MU93 164 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 MS4A18H0YCH9 400 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 GABARAPH6UMI1 98 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 LANCL1O43813 399 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 IGHA1P01876 353 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 B4GALT1P15291 398 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 VAMP1P23763 118 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 PRTN3P24158 256 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 GIPRP48546 466 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 CRYBA2P53672 197 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 PCBP3P57721 371 aaKnown RBP11.12□□□□□ -0.63
HDAC3-213ENST00000492506 RPS23P62266 143 aaKnown RBP11.12□□□□□ -0.63
HDAC3-213ENST00000492506 RAB1AP62820 205 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 CCL8P80075 99 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 CDK6Q00534 326 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 CDK5Q00535 292 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 MS4A18Q3C1V0 323 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 ALKBH6Q3KRA9 238 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 OR2B11Q5JQS5 317 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF813Q6ZN06 617 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 OR52J3Q8NH60 311 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF417Q8TAU3 575 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 TAAR8Q969N4 342 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 RAB39BQ96DA2 213 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 LRR1Q96L50 414 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 TSPAN32Q96QS1 320 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF587Q96SQ5 575 aaPredicted RBP11.12□□□□□ -0.63
HDAC3-213ENST00000492506 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 TUBA4BQ9H853 241 aa11.12□□□□□ -0.63
HDAC3-213ENST00000492506 UNKLQ9H9P5 680 aaKnown RBP11.12□□□□□ -0.63
HDAC3-213ENST00000492506 ZNF443Q9Y2A4 671 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms