RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 DDX18Q9NVP1 670 aaKnown RBP2□□□□□ -2.09
VTA1-204ENST00000491881 OR51B2Q9Y5P1 312 aa2□□□□□ -2.09
VTA1-204ENST00000491881 JMJD1CQ15652 2540 aa2□□□□□ -2.09
VTA1-204ENST00000491881 SPG11Q96JI7 2443 aa2□□□□□ -2.09
VTA1-204ENST00000491881 TNKS1BP1Q9C0C2 1729 aaKnown RBP2□□□□□ -2.09
VTA1-204ENST00000491881 NOTCH1P46531 2555 aa2□□□□□ -2.09
VTA1-204ENST00000491881 NPHP4O75161 1426 aaPredicted RBP2□□□□□ -2.09
VTA1-204ENST00000491881 DNMT1P26358 1616 aaKnown RBP1.99□□□□□ -2.09
VTA1-204ENST00000491881 POLQO75417 2590 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 A0A0B4J2E0 115 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 OR6C70A6NIJ9 312 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 CENPXA8MT69 81 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 TRDMT1O14717 391 aaKnown RBP1.99□□□□□ -2.09
VTA1-204ENST00000491881 CNMDO75829 334 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 GCGP01275 180 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 MMP7P09237 267 aaPredicted RBP1.99□□□□□ -2.09
VTA1-204ENST00000491881 GALR1P47211 349 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 BCAP31P51572 246 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 DAOAP59103 153 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 RPS11P62280 158 aaKnown RBP eCLIP1.99□□□□□ -2.09
VTA1-204ENST00000491881 PAFAH1B2P68402 229 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 PRKCDQ05655 676 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 ADIGQ0VDE8 80 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 KLHL40Q2TBA0 621 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 HHATQ5VTY9 493 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 STEAP4Q687X5 459 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 S100PBPQ96BU1 408 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 FAM19A4Q96LR4 140 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 UBE2E2Q96LR5 201 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 Q96MT0 163 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 SEC22CQ9BRL7 303 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 TBL1XR1Q9BZK7 514 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 IL22Q9GZX6 179 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 PRO3102Q9H379 93 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 PLEKHF2Q9H8W4 249 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 TMEM100Q9NV29 134 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 IL37Q9NZH6 218 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 RWDD2AQ9UIY3 292 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 RHBDD3Q9Y3P4 386 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.99□□□□□ -2.09
VTA1-204ENST00000491881 TENM4Q6N022 2769 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
VTA1-204ENST00000491881 IQGAP1P46940 1657 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 CNTLNQ9NXG0 1405 aa1.99□□□□□ -2.09
VTA1-204ENST00000491881 DOCK8Q8NF50 2099 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 LAMB2P55268 1798 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 AGLP35573 1532 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 ITPR1Q14643 2758 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 ARPC4-TTLL3A0A0A6YYG9 625 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 IGKV2-24A0A0C4DH68 120 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 ZNF99A8MXY4 864 aaPredicted RBP1.98□□□□□ -2.09
VTA1-204ENST00000491881 C16orf90A8MZG2 172 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 LINC01619G3V211 115 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 CCDC22O60826 627 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 SLC35G6P0C7Q6 338 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 NELFEP18615 380 aaKnown RBP1.98□□□□□ -2.09
VTA1-204ENST00000491881 TGFBR1P36897 503 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 TAS2R39P59534 338 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 SLC35A1P78382 337 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 ELF3P78545 371 aaPredicted RBP1.98□□□□□ -2.09
VTA1-204ENST00000491881 LCN2P80188 198 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 SPAG1Q07617 926 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 BAMBIQ13145 260 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 DOC2AQ14183 400 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 MAPRE2Q15555 327 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 KDM4DQ6B0I6 523 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 MRPL21Q7Z2W9 205 aaKnown RBP1.98□□□□□ -2.09
VTA1-204ENST00000491881 SGPP2Q8IWX5 399 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 OR5T3Q8NGG3 340 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 OR10Z1Q8NGY1 313 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 OR52N1Q8NH53 320 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 MRPL48Q96GC5 212 aaKnown RBP1.98□□□□□ -2.09
VTA1-204ENST00000491881 NAPGQ99747 312 aaPredicted RBP1.98□□□□□ -2.09
VTA1-204ENST00000491881 LHX5Q9H2C1 402 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 ARV1Q9H2C2 271 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 RGCCQ9H4X1 137 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 ARMC7Q9H6L4 198 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 LINC00574Q9H8X3 128 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 PRSS16Q9NQE7 514 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 RAB22AQ9UL26 194 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 A2ML1A8K2U0 1454 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 CSMD1Q96PZ7 3565 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 NBEAQ8NFP9 2946 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 SOGA1O94964 1423 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 C9orf84Q5VXU9 1444 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 PCLOQ9Y6V0 5065 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 IGSF10Q6WRI0 2623 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 NF1P21359 2839 aa1.98□□□□□ -2.09
VTA1-204ENST00000491881 FLNCQ14315 2725 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 NEXMIFQ5QGS0 1516 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 MROH2AA6NES4 1674 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 NBEAL2Q6ZNJ1 2754 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 LOC102724200A0A096LPH7 203 aaPredicted RBP1.97□□□□□ -2.09
VTA1-204ENST00000491881 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 TRAV8-4A0A0B4J246 113 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 CCL15-CCL14A0A0B4J2E2 113 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 DFFAO00273 331 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 CBR3O75828 277 aa1.97□□□□□ -2.09
VTA1-204ENST00000491881 PTTG1O95997 202 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms