RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 SIRPDQ9H106 197 aa15.31■□□□□ 0.04
NDUFB4-204ENST00000491335 ESM1Q9NQ30 184 aa15.31■□□□□ 0.04
NDUFB4-204ENST00000491335 INMTO95050 263 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 ZFPL1O95159 310 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 NDUFB7P17568 137 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 PRDX2P32119 198 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 GTF2A1P52655 376 aaPredicted RBP15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 CAV3P56539 151 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 ERVK11-1P61568 191 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 SLC34A1Q06495 639 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 MRPL28Q13084 256 aaKnown RBP15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 CNN3Q15417 329 aaKnown RBP15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 METTL11BQ5VVY1 283 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 UTS2BQ765I0 119 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 ZDHHC22Q8N966 263 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 DNAAF1Q8NEP3 725 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 SDSLQ96GA7 329 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 ZNF48Q96MX3 618 aaPredicted RBP15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 PDCD1LG2Q9BQ51 273 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 HES4Q9HCC6 221 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 MTCH1Q9NZJ7 389 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 HSPE1-MOB4S4R3N1 261 aa15.3■□□□□ 0.04
NDUFB4-204ENST00000491335 TRBV2A0A0J9YWF9 115 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 IRGMA1A4Y4 181 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 TMEM212A6NML5 194 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 F8VVB4 439 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 F8VWA3 439 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 CEBPDP49716 269 aaPredicted RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 RBP2P50120 134 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 ATP1B3P54709 279 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 OR2G6Q5TZ20 316 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 GPR157Q5UAW9 335 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 RBMS3Q6XE24 437 aaKnown RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 BRD3OSQ6XYD6 125 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 C9orf139Q6ZV77 190 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 SLC25A26Q70HW3 274 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 C8orf59Q8N0T1 100 aaPredicted RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 TMEM185AQ8NFB2 350 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 OR5AK2Q8NH90 309 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 C8orf46Q8TAG6 207 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 ZFAND2BQ8WV99 257 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 GGHQ92820 318 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 SLAMF9Q96A28 289 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 VCXQ9H320 206 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 ELL3Q9HB65 397 aaPredicted RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 ONECUT1Q9UBC0 465 aa15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 DIMT1Q9UNQ2 313 aaKnown RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 CAB39Q9Y376 341 aaPredicted RBP15.29■□□□□ 0.04
NDUFB4-204ENST00000491335 CENPVL3A0A0U1RRI6 287 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 TRIM77I1YAP6 450 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 CCDC159P0C7I6 412 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 PRKACBP22694 351 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 AZGP1P25311 298 aaKnown RBP15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 MTCP1P56278 107 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 XAF1Q6GPH4 301 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 LAIR2Q6ISS4 152 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 TMPRSS11AQ6ZMR5 421 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 HAVCR2Q8TDQ0 301 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 NRG4Q8WWG1 115 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 CEP19Q96LK0 163 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 DMRTB1Q96MA1 342 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 COMMD4Q9H0A8 199 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 OR14J1Q9UGF5 321 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 CLEC2DQ9UHP7 191 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 EXOSC1Q9Y3B2 195 aaKnown RBP15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 KPTNQ9Y664 436 aa15.28■□□□□ 0.04
NDUFB4-204ENST00000491335 CAPZA1P52907 286 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 PDCD1Q15116 288 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 RUSC1-AS1Q66K80 236 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 OR13C9Q8NGT0 318 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 FBLIM1Q8WUP2 373 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 TFAP2CQ92754 450 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 LHX4Q969G2 390 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 ZCCHC4Q9H5U6 513 aa15.27■□□□□ 0.04
NDUFB4-204ENST00000491335 SLC1A7O00341 560 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 XPNPEP2O43895 674 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 KNG1P01042 644 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 RPSAP08865 295 aaKnown RBP15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 OCM2P0CE71 109 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 OCMP0CE72 109 aaPredicted RBP15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 MYL12AP19105 171 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 POU3F4P49335 361 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 BPIFB3P59826 476 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 ST3GAL4Q11206 333 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 RPL22L1Q6P5R6 122 aaKnown RBP15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 LHFPL2Q6ZUX7 228 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 RNF144BQ7Z419 303 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 VMO1Q7Z5L0 202 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 MKXQ8IYA7 352 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 ZNF561Q8N587 486 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 Q8N7P7 452 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 FAM216AQ8WUB2 273 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 RFT1Q96AA3 541 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 SPSB1Q96BD6 273 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 OPALINQ96PE5 141 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 DUX5Q96PT3 197 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 SPACA5Q96QH8 159 aa15.26■□□□□ 0.03
NDUFB4-204ENST00000491335 BABAM2Q9NXR7 383 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms