RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 FER1L5A0AVI2 2057 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
RER1-207ENST00000488353 TRGC2P03986 189 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 SERPINA2P20848 420 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 MMP16P51512 607 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 TMEM50BP56557 158 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 UBE2KP61086 200 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 PCK2Q16822 640 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 SEMA6DQ8NFY4 1073 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 OR10AD1Q8NGE0 317 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 RARRES2Q99969 163 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 WWTR1Q9GZV5 400 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 MMACHCQ9Y4U1 282 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 WDFY3Q8IZQ1 3526 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 IGKV3D-11A0A0A0MRZ8 115 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 K7ESF4 209 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 CYB5BO43169 146 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 MT-ATP6P00846 226 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 GIMD1P0DJR0 217 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 PTGER4P35408 488 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
RER1-207ENST00000488353 ERVFRD-1P60508 538 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
RER1-207ENST00000488353 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
RER1-207ENST00000488353 AKR1C8PQ5T2L2 129 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 TCEAL6Q6IPX3 200 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 TGIF2LXQ8IUE1 241 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 CSNK2A3Q8NEV1 391 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 OIT3Q8WWZ8 545 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 NUDT22Q9BRQ3 303 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 URGCP-MRPS24S4R325 110 aa12.48□□□□□ -0.41
RER1-207ENST00000488353 IGHV3-20A0A0C4DH32 117 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 DUX1O43812 170 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 RAD51DO75771 328 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 AHSA1O95433 338 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 H2BFMP0C1H6 154 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 CXCL12P48061 93 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 GGNBP1Q5YKI7 109 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 LANCL3Q6ZV70 420 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 GALNTL5Q7Z4T8 443 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 SGPP2Q8IWX5 399 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 APCDD1LQ8NCL9 501 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 THAP3Q8WTV1 239 aaPredicted RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 DNASE2BQ8WZ79 361 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 RAB24Q969Q5 203 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 JSRP1Q96MG2 331 aaPredicted RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 TMEM59Q9BXS4 323 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 WFDC1Q9HC57 220 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 CACNA1EQ15878 2313 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 A0A1B0GV50 99 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 GPR137BO60478 399 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 CDC14BO60729 498 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 NPIPB7O75200 414 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 APOBEC1P41238 236 aaKnown RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 RELQ04864 619 aaPredicted RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 PLXDC1Q8IUK5 500 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 BSCL2Q96G97 398 aaPredicted RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 ARHGAP5-AS1Q96IT6 56 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 PACRGQ96M98 296 aaPredicted RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 SH3BGRL3Q9H299 93 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 COPS7AQ9UBW8 275 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 MRPS28Q9Y2Q9 187 aaKnown RBP12.47□□□□□ -0.41
RER1-207ENST00000488353 KCNIP3Q9Y2W7 256 aa12.47□□□□□ -0.41
RER1-207ENST00000488353 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 SMCO3A2RU48 225 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 TTRP02766 147 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 GLB1P16278 677 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 IL2RGP31785 369 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 DLK1P80370 383 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 SLC26A10Q8NG04 563 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 CDX2Q99626 313 aaPredicted RBP12.46□□□□□ -0.41
RER1-207ENST00000488353 SMOC1Q9H4F8 434 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 MED29Q9NX70 200 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 HS3ST3B1Q9Y662 390 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 MED12Q93074 2177 aa12.46□□□□□ -0.41
RER1-207ENST00000488353 A8MWP6 167 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 TRGC1P0CF51 173 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 ECI1P42126 302 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 DCAF7P61962 342 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 FOXK1P85037 733 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 SULF2Q8IWU5 870 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 ZNF248Q8NDW4 579 aa12.46□□□□□ -0.42
RER1-207ENST00000488353 DAZLQ92904 295 aaKnown RBP12.46□□□□□ -0.42
RER1-207ENST00000488353 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms