RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 DNAAF1Q8NEP3 725 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ANGPTL6Q8NI99 470 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ZNF671Q8TAW3 534 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 UFD1Q92890 307 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 GAFA1Q96PS6 74 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 NRIP2Q9BQI9 281 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 RBFOX1Q9NWB1 397 aaKnown RBP14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 HIF1ANQ9NWT6 349 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 NLKQ9UBE8 527 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ZNF222Q9UK12 451 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 SONP18583 2426 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 TRAV38-1A0A0B4J264 116 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 C22orf46C9J442 243 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 GABRPO00591 440 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 MAS1P04201 325 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 CD1AP06126 327 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 MSMBP08118 114 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 OCMP0CE72 109 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 RAB3AP20336 220 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 PRKACBP22694 351 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 DUSP1P28562 367 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 TGFBR2P37173 567 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 GABRA2P47869 451 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 OR3A4PP47883 348 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 ERVK11-1P61568 191 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 MLLT11Q13015 90 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 PDZK1IP1Q13113 114 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 IKZF1Q13422 519 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 PDCD1Q15116 288 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 DGUOKQ16854 277 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 ZNF773Q6PK81 442 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 UNQ9370/PRO34162Q6UXP9 181 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 DCDC5Q6ZRR9 648 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 ZNF367Q7RTV3 350 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 PHC2Q8IXK0 858 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 OR5D14Q8NGL3 314 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 OR10K1Q8NGX5 313 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 TMIGD2Q96BF3 282 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 RAB39BQ96DA2 213 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 NEIL1Q96FI4 390 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 YTHDF1Q9BYJ9 559 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 PKIBQ9C010 78 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 ELL3Q9HB65 397 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 DNAJB11Q9UBS4 358 aa14.26□□□□□ -0.13
SHROOM1-205ENST00000488072 RFPL4AA6NLU0 287 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 OR2AT4A6NND4 320 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 B4DSR2 109 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 RFPL4AL1F8VTS6 287 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 TMPRSS2O15393 492 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 SFTPBP07988 381 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 CPEP16870 476 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 ADRA2CP18825 462 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 PITPNBP48739 271 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 FABP5Q01469 135 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 IL24Q13007 206 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 KISS1Q15726 138 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 MICBQ29980 383 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 WDR25Q64LD2 544 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 C1orf229Q6ZS94 237 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 LHFPL2Q6ZUX7 228 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 CEACAM19Q7Z692 300 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 TMEM186Q96B77 213 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 SPSB1Q96BD6 273 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 CYYR1Q96J86 154 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 HES4Q9HCC6 221 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 ZNF581Q9P0T4 197 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 MIOXQ9UGB7 285 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 OR14J1Q9UGF5 321 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 MAB21L2Q9Y586 359 aa14.25□□□□□ -0.13
SHROOM1-205ENST00000488072 SVEP1Q4LDE5 3571 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 A8MV72 311 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 DVL1O14640 695 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 NOS1APO75052 506 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 NXPH2O95156 264 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 CDRT1O95170 752 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 CD2P06729 351 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 PSMB9P28065 219 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 NEDD8Q15843 81 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 CR1LQ2VPA4 569 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 DDI2Q5TDH0 399 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 UBE2UQ5VVX9 321 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 FAM166AQ6J272 317 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 OR8B3Q8NGG8 313 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 OR51F2Q8NH61 342 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 CEP19Q96LK0 163 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 TECTBQ96PL2 329 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 OR8B2Q96RD0 313 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 NEK6Q9HC98 313 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 ISYNA1Q9NPH2 558 aa14.24□□□□□ -0.13
SHROOM1-205ENST00000488072 A0A1W2PP11 408 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 SC5DO75845 299 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 FSTL3O95633 263 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 TMEM225BP0DP42 221 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 MUC1P15941 1255 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 BDKRB2P30411 391 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 GNB2P62879 340 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 PAX2Q02962 417 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 PRB3Q04118 309 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 KCTD21Q4G0X4 260 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 FAHD2BQ6P2I3 314 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms