RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ITPRIPQ8IWB1 547 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 CPNE9Q8IYJ1 553 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 KIF2BQ8N4N8 673 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 CCDC148Q8NFR7 591 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 OR8A1Q8NGG7 326 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 OR5H2Q8NGV7 314 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 TMEM234Q8WY98 164 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 THTPAQ9BU02 230 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 EXO5Q9H790 373 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 KLF12Q9Y4X4 402 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 ICOSQ9Y6W8 199 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 ENPP4Q9Y6X5 453 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 COL4A1P02462 1669 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 MIA3Q5JRA6 1907 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 IGHV3-43A0A0B4J1X8 118 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 TRAV8-4A0A0B4J246 113 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 IGHV2OR16-5A0A0B4J2B6 119 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 ZNF729A6NN14 1252 aaPredicted RBP0.68□□□□□ -2.3
SMC4-219ENST00000487747 ZNF99A8MXY4 864 aaPredicted RBP0.68□□□□□ -2.3
SMC4-219ENST00000487747 HACD1B0YJ81 288 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 NDUFS5O43920 106 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 P01737 135 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 TRGV3P03979 118 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 OR8G3PP0DMU2 310 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 P0DMU3 169 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 FAM231AP0DMU4 169 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 FAM231CP0DMU5 169 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 PRPS1L1P21108 318 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 MTPNP58546 118 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 RAB11AP62491 216 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 TPRG1LQ5T0D9 272 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 TTC19Q6DKK2 380 aaPredicted RBP0.68□□□□□ -2.3
SMC4-219ENST00000487747 PRNTQ86SH4 94 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 ZFP82Q8N141 532 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 CYB561A3Q8NBI2 242 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 INO80EQ8NBZ0 244 aaPredicted RBP0.68□□□□□ -2.3
SMC4-219ENST00000487747 BPIFB6Q8NFQ5 453 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 OR8S1Q8NH09 359 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 OR5P3Q8WZ94 311 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 NAT6Q93015 286 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 RAD51AP1Q96B01 352 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 FXYD5Q96DB9 178 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 SLC25A44Q96H78 314 aaPredicted RBP0.68□□□□□ -2.3
SMC4-219ENST00000487747 TRIB3Q96RU7 358 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 HIGD2AQ9BW72 106 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 TFR2Q9UP52 801 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 KLF13Q9Y2Y9 288 aaPredicted RBP0.68□□□□□ -2.3
SMC4-219ENST00000487747 ACOT9Q9Y305 439 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 TRAPPC1Q9Y5R8 145 aa0.68□□□□□ -2.3
SMC4-219ENST00000487747 IGHV3-21A0A0B4J1V1 117 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 A8MWP4 228 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ZNF701M0R085 212 aaPredicted RBP0.67□□□□□ -2.3
SMC4-219ENST00000487747 ISLRO14498 428 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 GCGP01275 180 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 KLK1P06870 262 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 CGB3P0DN86 165 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 CGB7P0DN87 165 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 HOXB8P17481 243 aaPredicted RBP0.67□□□□□ -2.3
SMC4-219ENST00000487747 ARL2P36404 184 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 LGALS7P47929 136 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 NUDT2P50583 147 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 C2orf54Q08AI8 447 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 CUL2Q13617 745 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 IL18Q14116 193 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ELOCQ15369 112 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 LGALSLQ3ZCW2 172 aaPredicted RBP0.67□□□□□ -2.3
SMC4-219ENST00000487747 CLLU1OSQ5K130 101 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 FAM231DQ6ZW35 169 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 AMN1Q8IY45 258 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 MICU2Q8IYU8 434 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 CMTM8Q8IZV2 173 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 OR4K2Q8NGD2 314 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ZFAND1Q8TCF1 268 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 GLYATL2Q8WU03 294 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ISOC2Q96AB3 205 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 GABRG3Q99928 467 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 NAA50Q9GZZ1 169 aaKnown RBP0.67□□□□□ -2.3
SMC4-219ENST00000487747 TXNIPQ9H3M7 391 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 CYP3A43Q9HB55 503 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ZC4H2Q9NQZ6 224 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 AHSPQ9NZD4 102 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 FADS3Q9Y5Q0 445 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ADAMTS7Q9UKP4 1686 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 ZNF469Q96JG9 3925 aaPredicted RBP0.67□□□□□ -2.3
SMC4-219ENST00000487747 SBNO1A3KN83 1393 aa0.67□□□□□ -2.3
SMC4-219ENST00000487747 IGKV1D-37A0A075B6S9 117 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 SERTM2A0A1B0GWG4 89 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 WRBO00258 174 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 DFFAO00273 331 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 TRDMT1O14717 391 aaKnown RBP0.66□□□□□ -2.3
SMC4-219ENST00000487747 FFAR1O14842 300 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 DNAJB6O75190 326 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 OR2A4O95047 310 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 IGKV1D-33P01593 117 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 IGKV1-33P01594 117 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 CALRP27797 417 aaKnown RBP0.66□□□□□ -2.3
SMC4-219ENST00000487747 PSMB2P49721 201 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 HCCSP53701 268 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 SLC18A1P54219 525 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 CCL23P55773 120 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms