RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 HPSE2Q8WWQ2 592 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 FAAP24Q9BTP7 215 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 RSRP1Q9BUV0 290 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SLC35B3Q9H1N7 401 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 OR51M1Q9H341 326 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 NECAP2Q9NVZ3 263 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 B3GALT1Q9Y5Z6 326 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 C2CD4DB7Z1M9 353 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 C1QL1O75973 258 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 DIRAS3O95661 229 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 PRH1P02810 166 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 ARG1P05089 322 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 OR8U8P0C7N1 319 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 GUCA1AP43080 201 aaPredicted RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 ENDOGQ14249 297 aaKnown RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 ABCA11PQ4W5N1 156 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 RHBDD2Q6NTF9 364 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SYT13Q7L8C5 426 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 LYZL2Q7Z4W2 148 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 KMT5CQ86Y97 462 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 LRTM2Q8N967 370 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 TSTD1Q8NFU3 115 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 OR5L2Q8NGL0 311 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 OR1J1Q8NGS3 322 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 RTN4IP1Q8WWV3 396 aaPredicted RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 TOMM40LQ969M1 308 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 C18orf12Q96KH6 178 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 WDR77Q9BQA1 342 aaPredicted RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 PBDC1Q9BVG4 233 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SUCNR1Q9BXA5 334 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 KCNJ16Q9NPI9 418 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 AK3Q9UIJ7 227 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 ZDHHC8Q9ULC8 765 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 UNC13CQ8NB66 2214 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 ADAMTS20P59510 1910 aa10.65□□□□□ -0.71
COL3A1-206ENST00000487010 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 XRCC2O43543 280 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 NQO2P16083 231 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 OPRM1P35372 400 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 MAS1LP35410 378 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 IL13RA2Q14627 380 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 FAM209BQ5JX69 171 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 ADAM5Q6NVV9 412 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 PPP1R3BQ86XI6 285 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 CCDC54Q8NEL0 328 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 NELFAQ9H3P2 528 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 HSF4Q9ULV5 492 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 HDGFL3Q9Y3E1 203 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 FBXO7Q9Y3I1 522 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 RANBP2P49792 3224 aaKnown RBP10.64□□□□□ -0.71
COL3A1-206ENST00000487010 ASXL3Q9C0F0 2248 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 TRAV20A0A0B4J274 112 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 A0A1B0GW64 132 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 A0A1W2PPE2 198 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 AP4M1O00189 453 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 CLN5O75503 358 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 PIAS2O75928 621 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 NR2C1P13056 603 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 MYF5P13349 255 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 DTYMKP23919 212 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 S100PP25815 95 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 DUSP1P28562 367 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 OTX1P32242 354 aaPredicted RBP10.64□□□□□ -0.71
COL3A1-206ENST00000487010 EIF2S3P41091 472 aaKnown RBP10.64□□□□□ -0.71
COL3A1-206ENST00000487010 CSNK1A1P48729 337 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 MTCP1P56278 107 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 NXPH1P58417 271 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 STARD6P59095 220 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 RAB1AP62820 205 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 HIST1H3AP68431 136 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 NHLH2Q02577 135 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 PHYHD1Q5SRE7 291 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 C10orf128Q5T292 105 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 HIST2H3PS2Q5TEC6 136 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 HIST2H3AQ71DI3 136 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 OR52M1Q8NGK5 317 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 METTL9Q9H1A3 318 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 GPR173Q9NS66 373 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 MYOTQ9UBF9 498 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 MIOXQ9UGB7 285 aa10.64□□□□□ -0.71
COL3A1-206ENST00000487010 NXT1Q9UKK6 140 aaKnown RBP10.64□□□□□ -0.71
COL3A1-206ENST00000487010 ARID1AO14497 2285 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 NSG1A0A0A6YYJ2 146 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 TXNL1O43396 289 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 OR2J2O76002 312 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 ZNF205O95201 554 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 OR2B8PP59922 312 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 TAF9Q16594 264 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 RSPO4Q2I0M5 234 aaPredicted RBP10.63□□□□□ -0.71
COL3A1-206ENST00000487010 TSPO2Q5TGU0 170 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 FOXL2NBQ6ZUU3 175 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 LRRC18Q8N456 261 aa10.63□□□□□ -0.71
COL3A1-206ENST00000487010 ZNF565Q8N9K5 539 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms