RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 TMEM123Q8N131 208 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 RTN4IP1Q8WWV3 396 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-211ENST00000486901 MR1Q95460 341 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-211ENST00000486901 AKIRIN1Q9H9L7 192 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-211ENST00000486901 PPP4R1LQ9P1A2 415 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 TIMM10BQ9Y5J6 103 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 KPTNQ9Y664 436 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 DSPP15924 2871 aaKnown RBP10.84□□□□□ -0.67
HSPG2-211ENST00000486901 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-211ENST00000486901 TRBV11-1A0A0K0K1C0 115 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF726A6NNF4 738 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 UBE2CO00762 179 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 SMIM6P0DI80 62 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF43P17038 809 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 ZNF84P51523 738 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 SMAD4Q13485 552 aaKnown RBP10.84□□□□□ -0.67
HSPG2-211ENST00000486901 SUMF2Q8NBJ7 301 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 SLC38A9Q8NBW4 561 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 OR1N1Q8NGS0 311 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 OR14K1Q8NGZ2 314 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 MEGF10Q96KG7 1140 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 LYZL4Q96KX0 146 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 GNRHR2Q96P88 292 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 GPR61Q9BZJ8 451 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 FSCN3Q9NQT6 498 aa10.84□□□□□ -0.67
HSPG2-211ENST00000486901 DEDDO75618 318 aa10.83□□□□□ -0.67
HSPG2-211ENST00000486901 JTBO76095 146 aa10.83□□□□□ -0.67
HSPG2-211ENST00000486901 EIF2S3P41091 472 aaKnown RBP10.83□□□□□ -0.67
HSPG2-211ENST00000486901 RAB2AP61019 212 aa10.83□□□□□ -0.67
HSPG2-211ENST00000486901 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.67
HSPG2-211ENST00000486901 SLC7A11Q9UPY5 501 aa10.83□□□□□ -0.67
HSPG2-211ENST00000486901 R4GN57 208 aa10.83□□□□□ -0.67
HSPG2-211ENST00000486901 LTBP2Q14767 1821 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 LOC400499M0QZD8 3231 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 A0A1B0GV90 55 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 A6NIZ1 184 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 HSPB2A8KAH6 182 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 AP4M1O00189 453 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 MSTNO14793 375 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 GSTP1P09211 210 aaKnown RBP10.83□□□□□ -0.68
HSPG2-211ENST00000486901 TAGLN2P37802 199 aaKnown RBP10.83□□□□□ -0.68
HSPG2-211ENST00000486901 HAAOP46952 286 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 RAP1BP61224 184 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 RPS23P62266 143 aaKnown RBP10.83□□□□□ -0.68
HSPG2-211ENST00000486901 RAP1AP62834 184 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 HSPB2Q16082 182 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 PNLIPRP3Q17RR3 467 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 RTL10Q7L3V2 364 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 LRP11Q86VZ4 500 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 TMEM234Q8WY98 164 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 SHDQ96IW2 340 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 SUCNR1Q9BXA5 334 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 OR2J2O76002 312 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 IGHV3-9P01782 118 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 CXCL1P09341 107 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 AGAP20933 346 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 EPHA1P21709 976 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 DUSP1P28562 367 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
HSPG2-211ENST00000486901 HYAL1Q12794 435 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 VAX1Q5SQQ9 334 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 SLC22A25Q6T423 547 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 UBALD1Q8TB05 177 aa10.83□□□□□ -0.68
HSPG2-211ENST00000486901 DCHS1Q96JQ0 3298 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 CCDC187A0A096LP49 1063 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 LIPT2A6NK58 231 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 CELA2AP08217 269 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 CFPP27918 469 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 TSC22D1Q15714 1073 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 SNAI3Q3KNW1 292 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 OR2G3Q8NGZ4 309 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 EMG1Q92979 244 aaKnown RBP10.82□□□□□ -0.68
HSPG2-211ENST00000486901 UCN2Q96RP3 112 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 TOLLIPQ9H0E2 274 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 LMAN1LQ9HAT1 526 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 PARP11Q9NR21 331 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 ZDHHC8Q9ULC8 765 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 CYB5BO43169 146 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 SSSCA1O60232 199 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 S100A8P05109 93 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 HEXAP06865 529 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 THBS4P35443 961 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 S100A12P80511 92 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 CFHR1Q03591 330 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 PHYHD1Q5SRE7 291 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 NAT6Q93015 286 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 PTX4Q96A99 478 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 OCSTAMPQ9BR26 566 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 SMOC1Q9H4F8 434 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 FGF21Q9NSA1 209 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 P4HTMQ9NXG6 502 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 OBP2AQ9NY56 170 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 LUZP4Q9P127 313 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms