RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 GABRA2P47869 451 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 ATP1B3P54709 279 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 RIPK1Q13546 671 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 IZUMO2Q6UXV1 221 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 LHFPL2Q6ZUX7 228 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 FGFRL1Q8N441 504 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 PNLDC1Q8NA58 520 aaKnown RBP15.08■□□□□ 0
COL1A1-207ENST00000486572 OR13C9Q8NGT0 318 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 GATAD2BQ8WXI9 593 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 OPALINQ96PE5 141 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 OCEL1Q9H607 264 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 HES4Q9HCC6 221 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 FKBP14Q9NWM8 211 aa15.08■□□□□ 0
COL1A1-207ENST00000486572 CUBNO60494 3623 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 TCF21O43680 179 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 ATP6V1G2O95670 118 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 HSPA13P48723 471 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 MTCP1P56278 107 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 FGF12P61328 243 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 ERVK11-1P61568 191 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 DGUOKQ16854 277 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 C6orf141Q5SZD1 244 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 SLC25A26Q70HW3 274 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 SERPINA12Q8IW75 414 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 BATF2Q8N1L9 274 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 PARP16Q8N5Y8 322 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 ZNF485Q8NCK3 441 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 RGP1Q92546 391 aaPredicted RBP15.07■□□□□ 0
COL1A1-207ENST00000486572 UPRTQ96BW1 309 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 SMIM19Q96E16 107 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 SDSLQ96GA7 329 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 CEP19Q96LK0 163 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 ANKRD60Q9BZ19 345 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 ZCCHC4Q9H5U6 513 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 NEK6Q9HC98 313 aa15.07■□□□□ 0
COL1A1-207ENST00000486572 SLC25A10Q9UBX3 287 aaPredicted RBP15.07■□□□□ 0
COL1A1-207ENST00000486572 RPUSD1Q9UJJ7 312 aaKnown RBP15.07■□□□□ 0
COL1A1-207ENST00000486572 ZNF879B4DU55 563 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 SLC1A7O00341 560 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 MYL12BO14950 172 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 OGG1O15527 345 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 LALBAP00709 142 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 MT-ND2P03891 347 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 MYF6P23409 242 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 C21orf33P30042 268 aaPredicted RBP15.06■□□□□ 0
COL1A1-207ENST00000486572 KLF17Q5JT82 389 aaPredicted RBP15.06■□□□□ 0
COL1A1-207ENST00000486572 OR5D14Q8NGL3 314 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 GPR148Q8TDV2 347 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 SLAMF9Q96A28 289 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 MTCH1Q9NZJ7 389 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 NUP50Q9UKX7 468 aa15.06■□□□□ 0
COL1A1-207ENST00000486572 SIRT4Q9Y6E7 314 aaPredicted RBP15.06■□□□□ 0
COL1A1-207ENST00000486572 RFPL4AA6NLU0 287 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 RFPL4AL1F8VTS6 287 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 SULT1B1O43704 296 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 ALX3O95076 343 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 CYB5AP00167 134 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 POU3F4P49335 361 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 CAV3P56539 151 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 TAS2R43P59537 309 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 MKXQ8IYA7 352 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 BPIFB2Q8N4F0 458 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 ZNRF1Q8ND25 227 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 TMEM185AQ8NFB2 350 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 ZNF418Q8TF45 676 aaPredicted RBP15.05■□□□□ -0
COL1A1-207ENST00000486572 H1FXQ92522 213 aaKnown RBP15.05■□□□□ -0
COL1A1-207ENST00000486572 DCTN5Q9BTE1 182 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 SCN3BQ9NY72 215 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 ZNF281Q9Y2X9 895 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 MAB21L2Q9Y586 359 aa15.05■□□□□ -0
COL1A1-207ENST00000486572 A0A0A6YYJ9 748 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 TRAV40A0A0B4J280 105 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 KNG1P01042 644 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 CDK1P06493 297 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 CD2P06729 351 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 NDUFB7P17568 137 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 FPR2P25090 351 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 PRDX2P32119 198 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 SOX2P48431 317 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 WNT4P56705 351 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 METTL11BQ5VVY1 283 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 DMKNQ6E0U4 476 aaPredicted RBP15.04■□□□□ -0
COL1A1-207ENST00000486572 Q8IYB0 196 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 ZNF561Q8N587 486 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 CD177Q8N6Q3 437 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 LY6G5BQ8NDX9 201 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 MYDGFQ969H8 173 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 DMRTB1Q96MA1 342 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 WDFY2Q96P53 400 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 SLC6A7Q99884 636 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 PCGF1Q9BSM1 259 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 CNTD2Q9H8S5 307 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 OR14J1Q9UGF5 321 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 ERGIC3Q9Y282 383 aa15.04■□□□□ -0
COL1A1-207ENST00000486572 PTGES3LE9PB15 166 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 F8VVB4 439 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 F8VWA3 439 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 TOX4O94842 621 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 INMTO95050 263 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 SFTPBP07988 381 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms