RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 NMES1Q9C002 83 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 TINAGL1Q9GZM7 467 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 PBOV1Q9GZY1 135 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 CST11Q9H112 138 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 CALHM2Q9HA72 323 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 TAS2R3Q9NYW6 316 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 CRIM1Q9NZV1 1036 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 SETD2Q9BYW2 2564 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 TRAV14DV4A0A0A6YYC5 116 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 TMEM235A6NFC5 223 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 LIPT2A6NK58 231 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 C17orf51A8MQB3 221 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 P2RY10O00398 339 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 GMFGO60234 142 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 GPANK1O95872 356 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 CTSSP25774 331 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 OPRM1P35372 400 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF93P35789 620 aaPredicted RBP7.85□□□□□ -1.15
COL12A1-208ENST00000486533 EIF1P41567 113 aaKnown RBP7.85□□□□□ -1.15
COL12A1-208ENST00000486533 GFRA1P56159 465 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 PLA2G7Q13093 441 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 SMUG1Q53HV7 270 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 PAN3Q58A45 887 aaKnown RBP7.85□□□□□ -1.15
COL12A1-208ENST00000486533 LY6G6FQ5SQ64 297 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 SFRP5Q5T4F7 317 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 C3orf33Q6P1S2 294 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 PLXDC2Q6UX71 529 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF813Q6ZN06 617 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 DOK3Q7L591 496 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF101Q8IZC7 436 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 C9orf106Q8NAJ2 232 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 NOXO1Q8NFA2 376 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 STOML3Q8TAV4 291 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 NRGNQ92686 78 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 ARL11Q969Q4 196 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 PTGES2Q9H7Z7 377 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 FAM206AQ9NX38 181 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 KLHL13Q9P2N7 655 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 MBD2Q9UBB5 411 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 FOXD3Q9UJU5 478 aaPredicted RBP7.85□□□□□ -1.15
COL12A1-208ENST00000486533 MED12LQ86YW9 2145 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 MED13LQ71F56 2210 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 C2CD3Q4AC94 2353 aa7.85□□□□□ -1.15
COL12A1-208ENST00000486533 A0A087WZY1 265 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 IGLV3-32A0A0A0MS00 114 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 C5orf51A6NDU8 294 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 MPTX1A8MV57 137 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 F5H0A9 414 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 MS4A18H0YCH9 400 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 H3BSH0 61 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 CA11O75493 328 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 NAT1P18440 290 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 VAMP1P23763 118 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 IL32P24001 234 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 FPR2P25090 351 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 PSMB6P28072 239 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 ADH6P28332 368 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 BIDP55957 195 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 DSCR4P56555 118 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 ABCA4P78363 2273 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 FOXF2Q12947 444 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 SURF2Q15527 256 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 KCNMB1Q16558 191 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 MS4A18Q3C1V0 323 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 FBXL19-AS1Q494R0 122 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 TMEM128Q5BJH2 165 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 RAET1LQ5VY80 246 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 NAA40Q86UY6 237 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 GCNT2Q8N0V5 402 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 KDM8Q8N371 416 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 OR13C8Q8NGS7 320 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 OR4K15Q8NH41 348 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 PCNPQ8WW12 178 aaKnown RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 C11orf40Q8WZ69 217 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 FGGYQ96C11 551 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 INTS12Q96CB8 462 aaKnown RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 C10orf35Q96D05 121 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 SLC6A7Q99884 636 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 OR11A1Q9GZK7 315 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 CNTD2Q9H8S5 307 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 CHMP1AQ9HD42 196 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 RAB18Q9NP72 206 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 ANAPC10Q9UM13 185 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 MRPS28Q9Y2Q9 187 aaKnown RBP7.84□□□□□ -1.15
COL12A1-208ENST00000486533 HDGFL3Q9Y3E1 203 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 RNF222A6NCQ9 220 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 A6NNC1 897 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF726A6NNF4 738 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 TMEM14DPA8MWL7 114 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 FAM25EA8MYX2 175 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 RAB27BO00194 218 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 TAAR5O14804 337 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 SCO1O75880 301 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 IL18BPO95998 194 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 TTRP02766 147 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 RLN2P04090 185 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF708P17019 499 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 LHX2P50458 406 aa7.84□□□□□ -1.15
COL12A1-208ENST00000486533 LUMP51884 338 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms